// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;
unit item=scalar;
unit substance = mole;
unit volume = litre;
unit area = metre^2;
unit length = metre;
unit time = second;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// J0: RuBP_ch x_CO2 <=> 2PGA_ch 
// J1: GAP_ch => DHAP_ch 
// J2: GAP_ch DHAP_ch => FBP_ch 
// J3: GAP_ch F6P_ch => X5P_ch E4P_ch 
// J4: DHAP_ch E4P_ch => SBP_ch 
// J5: S7P_ch GAP_ch => R5P_ch X5P_ch 
// J6: R5P_ch => Ru5P_ch 
// J7: X5P_ch => Ru5P_ch 
// J8: x_Pi_cyt PGA_ch <=> x_PGA_cyt Pi_ch 
// J9: x_Pi_cyt GAP_ch <=> x_GAP_cyt Pi_ch 
// J10: F6P_ch => G6P_ch 
// J11: G6P_ch => G1P_ch 
// J12: Pi_ch ADP_ch <=> ATP_ch 
// J13: Ru5P_ch ATP_ch <=> RuBP_ch ADP_ch 
// J14: PGA_ch ATP_ch <=> BPGA_ch ADP_ch 
// J15: ATP_ch G1P_ch <=> x_Starch_ch ADP_ch Pi_ch 
// J16: x_Starch_ch Pi_ch <=> G1P_ch 
// J17: FBP_ch <=> F6P_ch Pi_ch 
// J18: x_Pi_cyt DHAP_ch <=> x_DHAP_cyt Pi_ch 
// J19: x_NADPH_ch BPGA_ch x_Proton_ch <=> x_NADP_ch GAP_ch Pi_ch 
// J20: SBP_ch <=> Pi_ch S7P_ch 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real uVol = 1 volume;
  real Light_on = 1;
  private real x_CO2.amt(time) substance;
  real x_CO2 substance/volume;
  real x_CO2.init substance;
  real RuBP_ch(time) substance;
  private real RuBP_ch.conc(time) substance/volume;
  real RuBP_ch.init substance;
  real PGA_ch(time) substance;
  private real PGA_ch.conc(time) substance/volume;
  real PGA_ch.init substance;
  real ATP_ch(time) substance;
  private real ATP_ch.conc(time) substance/volume;
  real ATP_ch.init substance;
  real BPGA_ch(time) substance;
  private real BPGA_ch.conc(time) substance/volume;
  real BPGA_ch.init substance;
  real x_NADPH_ch substance;
  private real x_NADPH_ch.conc(time) substance/volume;
  real x_NADPH_ch.init substance;
  private real GAP_ch.amt(time) substance;
  real GAP_ch(time) substance/volume;
  real GAP_ch.init substance;
  private real Pi_ch.amt(time) substance;
  real Pi_ch(time) substance/volume;
  real Pi_ch.init substance;
  private real DHAP_ch.amt(time) substance;
  real DHAP_ch(time) substance/volume;
  real DHAP_ch.init substance;
  private real FBP_ch.amt(time) substance;
  real FBP_ch(time) substance/volume;
  real FBP_ch.init substance;
  private real F6P_ch.amt(time) substance;
  real F6P_ch(time) substance/volume;
  real F6P_ch.init substance;
  private real E4P_ch.amt(time) substance;
  real E4P_ch(time) substance/volume;
  real E4P_ch.init substance;
  private real X5P_ch.amt(time) substance;
  real X5P_ch(time) substance/volume;
  real X5P_ch.init substance;
  private real SBP_ch.amt(time) substance;
  real SBP_ch(time) substance/volume;
  real SBP_ch.init substance;
  private real S7P_ch.amt(time) substance;
  real S7P_ch(time) substance/volume;
  real S7P_ch.init substance;
  private real R5P_ch.amt(time) substance;
  real R5P_ch(time) substance/volume;
  real R5P_ch.init substance;
  private real Ru5P_ch.amt(time) substance;
  real Ru5P_ch(time) substance/volume;
  real Ru5P_ch.init substance;
  private real x_Pi_cyt.amt(time) substance;
  real x_Pi_cyt substance/volume;
  real x_Pi_cyt.init substance;
  private real x_GAP_cyt.amt(time) substance;
  real x_GAP_cyt substance/volume;
  real x_GAP_cyt.init substance;
  private real G6P_ch.amt(time) substance;
  real G6P_ch(time) substance/volume;
  real G6P_ch.init substance;
  private real x_NADP_ch.amt(time) substance;
  real x_NADP_ch substance/volume;
  real x_NADP_ch.init substance;
  private real x_PGA_cyt.amt(time) substance;
  real x_PGA_cyt substance/volume;
  real x_PGA_cyt.init substance;
  private real ADP_ch.amt(time) substance;
  real ADP_ch(time) substance/volume;
  real ADP_ch.init substance;
  private real x_DHAP_cyt.amt(time) substance;
  real x_DHAP_cyt substance/volume;
  real x_DHAP_cyt.init substance;
  private real x_Proton_ch.amt(time) substance;
  real x_Proton_ch substance/volume;
  real x_Proton_ch.init substance;
  private real G1P_ch.amt(time) substance;
  real G1P_ch(time) substance/volume;
  real G1P_ch.init substance;
  private real x_Starch_ch.amt(time) substance;
  real x_Starch_ch substance/volume;
  real x_Starch_ch.init substance;
  real J0.rate(time) substance/time;
  real Rbco_vm = 340;
  real Rbco_km = .02;
  real Rbco_KiPGA = .84;
  real Rbco_KiFBP = .04;
  real Rbco_KiSBP = .075;
  real Rbco_KiPi = .9;
  real Rbco_KiNADPH = .07;
  real J1.rate(time) substance/time;
  real TPI_v = 5E9;
  real q4 = 22;
  real J2.rate(time) substance/time;
  real F_Aldo_v = 5E9;
  real q5 = 7.1;
  real J3.rate(time) substance/time;
  real F_TKL_v = 5E9;
  real q7 = .084;
  real J4.rate(time) substance/time;
  real E_Aldo_v = 5E9;
  real q8 = 13;
  real J5.rate(time) substance/time;
  real G_TKL_v = 5E9;
  real q10 = .85;
  real J6.rate(time) substance/time;
  real R5Piso_v = 5E9;
  real q11 = .4;
  real J7.rate(time) substance/time;
  real X5Pepi_v = 5E9;
  real q12 = .67;
  real J8.rate(time) substance/time;
  real PGA_xpMult = .2;
  real TP_Piap_vm = 250;
  real TP_Piap_kPGA_ch = .25;
  real TP_Piap_kPi_cyt = .74;
  real TP_Piap_kPi_ch = .63;
  real TP_Piap_kDHAP_ch = .077;
  real TP_Piap_kGAP_ch = .075;
  real J9.rate(time) substance/time;
  real J10.rate(time) substance/time;
  real PGI_v = 5E9;
  real q14 = 2.3;
  real J11.rate(time) substance/time;
  real PGM_v = 5E9;
  real q15 = .058;
  real J12.rate(time) substance/time;
  real LR_vm = 1500;
  real LR_kmADP = .014;
  real LR_kmPi = .3;
  real J13.rate(time) substance/time;
  real Ru5Pk_ch_vm = 1E4;
  real Ru5Pk_ch_km1 = .05;
  real Ru5Pk_ch_KiPGA = 2;
  real Ru5Pk_ch_KiRuBP = .7;
  real Ru5Pk_ch_KiPi = 4;
  real Ru5Pk_ch_KiADP1 = 2.5;
  real Ru5Pk_ch_km2 = .05;
  real Ru5Pk_ch_KiADP2 = .4;
  real J14.rate(time) substance/time;
  real PGK_v = 5E9;
  real q2 = 3.1E-4;
  real J15.rate(time) substance/time;
  real StSyn_vm = 40;
  real stsyn_ch_km1 = .08;
  real stsyn_ch_Ki = 10;
  real stsyn_ch_km2 = .08;
  real stsyn_ch_ka1 = .1;
  real stsyn_ch_ka2 = .02;
  real stsyn_ch_ka3 = .02;
  real J16.rate(time) substance/time;
  real StPase_Vm = 40;
  real StPase_km = 5;
  real StPase_kiG1P = 3.12;
  real J17.rate(time) substance/time;
  real FBPase_ch_vm = 200;
  real FBPase_ch_km = .03;
  real FBPase_ch_KiF6P = .7;
  real FBPase_ch_KiPi = 12;
  real J18.rate(time) substance/time;
  real J19.rate(time) substance/time;
  real G3Pdh_v = 5E9;
  real q3 = 1.6E7;
  real J20.rate(time) substance/time;
  real SBPase_ch_vm = 40;
  real SBPase_ch_km = .013;
  real SBPase_ch_KiPi = 12;

  // equations
  x_CO2.amt = x_CO2*uVol;
  x_CO2 = x_CO2.init/uVol;
  x_CO2.init = 1;
  when (time=time.min) RuBP_ch = RuBP_ch.init;
  RuBP_ch:time = -1*J0.rate + J13.rate;
  RuBP_ch.conc = RuBP_ch/uVol;
  RuBP_ch.init = .33644;
  when (time=time.min) PGA_ch = PGA_ch.init;
  PGA_ch:time = 2*J0.rate + -1*J8.rate + -1*J14.rate;
  PGA_ch.conc = PGA_ch/uVol;
  PGA_ch.init = 3.35479;
  when (time=time.min) ATP_ch = ATP_ch.init;
  ATP_ch:time = J12.rate + -1*J13.rate + -1*J14.rate + -1*J15.rate;
  ATP_ch.conc = ATP_ch/uVol;
  ATP_ch.init = .49806;
  when (time=time.min) BPGA_ch = BPGA_ch.init;
  BPGA_ch:time = J14.rate + -1*J19.rate;
  BPGA_ch.conc = BPGA_ch/uVol;
  BPGA_ch.init = .14825;
  x_NADPH_ch = x_NADPH_ch.init;
  x_NADPH_ch.conc = x_NADPH_ch/uVol;
  x_NADPH_ch.init = .21;
  when (time=time.min) GAP_ch.amt = GAP_ch.init;
  GAP_ch.amt:time = -1*J1.rate + -1*J2.rate + -1*J3.rate + -1*J5.rate + -1*J9.rate + J19.rate;
  GAP_ch = GAP_ch.amt/uVol;
  GAP_ch.init = .01334;
  when (time=time.min) Pi_ch.amt = Pi_ch.init;
  Pi_ch.amt:time = J8.rate + J9.rate + -1*J12.rate + J15.rate + -1*J16.rate + J17.rate + J18.rate + J19.rate + J20.rate;
  Pi_ch = Pi_ch.amt/uVol;
  Pi_ch.init = 1.5662;
  when (time=time.min) DHAP_ch.amt = DHAP_ch.init;
  DHAP_ch.amt:time = J1.rate + -1*J2.rate + -1*J4.rate + -1*J18.rate;
  DHAP_ch = DHAP_ch.amt/uVol;
  DHAP_ch.init = .29345;
  when (time=time.min) FBP_ch.amt = FBP_ch.init;
  FBP_ch.amt:time = J2.rate + -1*J17.rate;
  FBP_ch = FBP_ch.amt/uVol;
  FBP_ch.init = .02776;
  when (time=time.min) F6P_ch.amt = F6P_ch.init;
  F6P_ch.amt:time = -1*J3.rate + -1*J10.rate + J17.rate;
  F6P_ch = F6P_ch.amt/uVol;
  F6P_ch.init = 1.36481;
  when (time=time.min) E4P_ch.amt = E4P_ch.init;
  E4P_ch.amt:time = J3.rate + -1*J4.rate;
  E4P_ch = E4P_ch.amt/uVol;
  E4P_ch.init = .41021;
  when (time=time.min) X5P_ch.amt = X5P_ch.init;
  X5P_ch.amt:time = J3.rate + J5.rate + -1*J7.rate;
  X5P_ch = X5P_ch.amt/uVol;
  X5P_ch.init = .00363;
  when (time=time.min) SBP_ch.amt = SBP_ch.init;
  SBP_ch.amt:time = J4.rate + -1*J20.rate;
  SBP_ch = SBP_ch.amt/uVol;
  SBP_ch.init = 1.56486;
  when (time=time.min) S7P_ch.amt = S7P_ch.init;
  S7P_ch.amt:time = -1*J5.rate + J20.rate;
  S7P_ch = S7P_ch.amt/uVol;
  S7P_ch.init = .00541;
  when (time=time.min) R5P_ch.amt = R5P_ch.init;
  R5P_ch.amt:time = J5.rate + -1*J6.rate;
  R5P_ch = R5P_ch.amt/uVol;
  R5P_ch.init = .00599;
  when (time=time.min) Ru5P_ch.amt = Ru5P_ch.init;
  Ru5P_ch.amt:time = J6.rate + J7.rate + -1*J13.rate;
  Ru5P_ch = Ru5P_ch.amt/uVol;
  Ru5P_ch.init = .00235;
  x_Pi_cyt.amt = x_Pi_cyt*uVol;
  x_Pi_cyt = x_Pi_cyt.init/uVol;
  x_Pi_cyt.init = .5;
  x_GAP_cyt.amt = x_GAP_cyt*uVol;
  x_GAP_cyt = x_GAP_cyt.init/uVol;
  x_GAP_cyt.init = 1;
  when (time=time.min) G6P_ch.amt = G6P_ch.init;
  G6P_ch.amt:time = J10.rate + -1*J11.rate;
  G6P_ch = G6P_ch.amt/uVol;
  G6P_ch.init = 3.1396;
  x_NADP_ch.amt = x_NADP_ch*uVol;
  x_NADP_ch = x_NADP_ch.init/uVol;
  x_NADP_ch.init = .29;
  x_PGA_cyt.amt = x_PGA_cyt*uVol;
  x_PGA_cyt = x_PGA_cyt.init/uVol;
  x_PGA_cyt.init = 1;
  when (time=time.min) ADP_ch.amt = ADP_ch.init;
  ADP_ch.amt:time = -1*J12.rate + J13.rate + J14.rate + J15.rate;
  ADP_ch = ADP_ch.amt/uVol;
  ADP_ch.init = .00149;
  x_DHAP_cyt.amt = x_DHAP_cyt*uVol;
  x_DHAP_cyt = x_DHAP_cyt.init/uVol;
  x_DHAP_cyt.init = 1;
  x_Proton_ch.amt = x_Proton_ch*uVol;
  x_Proton_ch = x_Proton_ch.init/uVol;
  x_Proton_ch.init = 1.26E-5;
  when (time=time.min) G1P_ch.amt = G1P_ch.init;
  G1P_ch.amt:time = J11.rate + -1*J15.rate + J16.rate;
  G1P_ch = G1P_ch.amt/uVol;
  G1P_ch.init = .18206;
  x_Starch_ch.amt = x_Starch_ch*uVol;
  x_Starch_ch = x_Starch_ch.init/uVol;
  x_Starch_ch.init = 1;
  J0.rate = Light_on*Rbco_vm*RuBP_ch/(RuBP_ch+Rbco_km*(1+PGA_ch/Rbco_KiPGA+FBP_ch/Rbco_KiFBP+SBP_ch/Rbco_KiSBP+Pi_ch/Rbco_KiPi+x_NADPH_ch/Rbco_KiNADPH));
  J1.rate = TPI_v*(GAP_ch-DHAP_ch/q4);
  J2.rate = F_Aldo_v*(DHAP_ch*GAP_ch-FBP_ch/q5);
  J3.rate = F_TKL_v*(F6P_ch*GAP_ch-E4P_ch*X5P_ch/q7);
  J4.rate = E_Aldo_v*(E4P_ch*DHAP_ch-SBP_ch/q8);
  J5.rate = G_TKL_v*(GAP_ch*S7P_ch-X5P_ch*R5P_ch/q10);
  J6.rate = R5Piso_v*(R5P_ch-Ru5P_ch/q11);
  J7.rate = X5Pepi_v*(X5P_ch-Ru5P_ch/q12);
  J8.rate = PGA_xpMult*TP_Piap_vm*PGA_ch/(TP_Piap_kPGA_ch*(1+(1+TP_Piap_kPi_cyt/x_Pi_cyt)*(Pi_ch/TP_Piap_kPi_ch+PGA_ch/TP_Piap_kPGA_ch+DHAP_ch/TP_Piap_kDHAP_ch+GAP_ch/TP_Piap_kGAP_ch)));
  J9.rate = TP_Piap_vm*GAP_ch/(TP_Piap_kGAP_ch*(1+(1+TP_Piap_kPi_cyt/x_Pi_cyt)*(Pi_ch/TP_Piap_kPi_ch+PGA_ch/TP_Piap_kPGA_ch+DHAP_ch/TP_Piap_kDHAP_ch+GAP_ch/TP_Piap_kGAP_ch)));
  J10.rate = PGI_v*(F6P_ch-G6P_ch/q14);
  J11.rate = PGM_v*(G6P_ch-G1P_ch/q15);
  J12.rate = Light_on*LR_vm*ADP_ch*Pi_ch/((ADP_ch+LR_kmADP)*(Pi_ch+LR_kmPi));
  J13.rate = Light_on*Ru5Pk_ch_vm*Ru5P_ch*ATP_ch/((Ru5P_ch+Ru5Pk_ch_km1*(1+PGA_ch/Ru5Pk_ch_KiPGA+RuBP_ch/Ru5Pk_ch_KiRuBP+Pi_ch/Ru5Pk_ch_KiPi))*(ATP_ch*(1+ADP_ch/Ru5Pk_ch_KiADP1)+Ru5Pk_ch_km2*(1+ADP_ch/Ru5Pk_ch_KiADP2)));
  J14.rate = Light_on*PGK_v*(PGA_ch*ATP_ch-BPGA_ch*ADP_ch/q2);
  J15.rate = StSyn_vm*G1P_ch*ATP_ch/((G1P_ch+stsyn_ch_km1)*(1+ADP_ch/stsyn_ch_Ki)*(ATP_ch+stsyn_ch_km2)+stsyn_ch_km2*Pi_ch/(stsyn_ch_ka1*PGA_ch)+stsyn_ch_ka2*F6P_ch+stsyn_ch_ka3*FBP_ch);
  J16.rate = StPase_Vm*Pi_ch/(Pi_ch+StPase_km*(1+G1P_ch/StPase_kiG1P));
  J17.rate = Light_on*FBPase_ch_vm*FBP_ch/(FBP_ch+FBPase_ch_km*(1+F6P_ch/FBPase_ch_KiF6P+Pi_ch/FBPase_ch_KiPi));
  J18.rate = TP_Piap_vm*DHAP_ch/(TP_Piap_kDHAP_ch*(1+(1+TP_Piap_kPi_cyt/x_Pi_cyt)*(Pi_ch/TP_Piap_kPi_ch+PGA_ch/TP_Piap_kPGA_ch+DHAP_ch/TP_Piap_kDHAP_ch+GAP_ch/TP_Piap_kGAP_ch)));
  J19.rate = Light_on*G3Pdh_v*(BPGA_ch*x_NADPH_ch*x_Proton_ch-x_NADP_ch*GAP_ch*Pi_ch/q3);
  J20.rate = Light_on*SBPase_ch_vm*SBP_ch/(SBP_ch+SBPase_ch_km*(1+Pi_ch/SBPase_ch_KiPi));

  // variable properties
  uVol.sbmlRole="compartment";
  Light_on.sbmlRole="parameter";
  x_CO2.amt.sbmlRole="speciesAmount";
  x_CO2.sbmlRole="speciesConcentration";
  x_CO2.sbmlCompartment="uVol";
  x_CO2.init.sbmlRole="speciesInitialAmount";
  RuBP_ch.sbmlRole="speciesAmount";
  RuBP_ch.sbmlCompartment="uVol";
  RuBP_ch.conc.sbmlRole="speciesConcentration";
  RuBP_ch.init.sbmlRole="speciesInitialAmount";
  PGA_ch.sbmlRole="speciesAmount";
  PGA_ch.sbmlCompartment="uVol";
  PGA_ch.conc.sbmlRole="speciesConcentration";
  PGA_ch.init.sbmlRole="speciesInitialAmount";
  ATP_ch.sbmlRole="speciesAmount";
  ATP_ch.sbmlCompartment="uVol";
  ATP_ch.conc.sbmlRole="speciesConcentration";
  ATP_ch.init.sbmlRole="speciesInitialAmount";
  BPGA_ch.sbmlRole="speciesAmount";
  BPGA_ch.sbmlCompartment="uVol";
  BPGA_ch.conc.sbmlRole="speciesConcentration";
  BPGA_ch.init.sbmlRole="speciesInitialAmount";
  x_NADPH_ch.sbmlRole="speciesAmount";
  x_NADPH_ch.sbmlCompartment="uVol";
  x_NADPH_ch.conc.sbmlRole="speciesConcentration";
  x_NADPH_ch.init.sbmlRole="speciesInitialAmount";
  GAP_ch.amt.sbmlRole="speciesAmount";
  GAP_ch.sbmlRole="speciesConcentration";
  GAP_ch.sbmlCompartment="uVol";
  GAP_ch.init.sbmlRole="speciesInitialAmount";
  Pi_ch.amt.sbmlRole="speciesAmount";
  Pi_ch.sbmlRole="speciesConcentration";
  Pi_ch.sbmlCompartment="uVol";
  Pi_ch.init.sbmlRole="speciesInitialAmount";
  DHAP_ch.amt.sbmlRole="speciesAmount";
  DHAP_ch.sbmlRole="speciesConcentration";
  DHAP_ch.sbmlCompartment="uVol";
  DHAP_ch.init.sbmlRole="speciesInitialAmount";
  FBP_ch.amt.sbmlRole="speciesAmount";
  FBP_ch.sbmlRole="speciesConcentration";
  FBP_ch.sbmlCompartment="uVol";
  FBP_ch.init.sbmlRole="speciesInitialAmount";
  F6P_ch.amt.sbmlRole="speciesAmount";
  F6P_ch.sbmlRole="speciesConcentration";
  F6P_ch.sbmlCompartment="uVol";
  F6P_ch.init.sbmlRole="speciesInitialAmount";
  E4P_ch.amt.sbmlRole="speciesAmount";
  E4P_ch.sbmlRole="speciesConcentration";
  E4P_ch.sbmlCompartment="uVol";
  E4P_ch.init.sbmlRole="speciesInitialAmount";
  X5P_ch.amt.sbmlRole="speciesAmount";
  X5P_ch.sbmlRole="speciesConcentration";
  X5P_ch.sbmlCompartment="uVol";
  X5P_ch.init.sbmlRole="speciesInitialAmount";
  SBP_ch.amt.sbmlRole="speciesAmount";
  SBP_ch.sbmlRole="speciesConcentration";
  SBP_ch.sbmlCompartment="uVol";
  SBP_ch.init.sbmlRole="speciesInitialAmount";
  S7P_ch.amt.sbmlRole="speciesAmount";
  S7P_ch.sbmlRole="speciesConcentration";
  S7P_ch.sbmlCompartment="uVol";
  S7P_ch.init.sbmlRole="speciesInitialAmount";
  R5P_ch.amt.sbmlRole="speciesAmount";
  R5P_ch.sbmlRole="speciesConcentration";
  R5P_ch.sbmlCompartment="uVol";
  R5P_ch.init.sbmlRole="speciesInitialAmount";
  Ru5P_ch.amt.sbmlRole="speciesAmount";
  Ru5P_ch.sbmlRole="speciesConcentration";
  Ru5P_ch.sbmlCompartment="uVol";
  Ru5P_ch.init.sbmlRole="speciesInitialAmount";
  x_Pi_cyt.amt.sbmlRole="speciesAmount";
  x_Pi_cyt.sbmlRole="speciesConcentration";
  x_Pi_cyt.sbmlCompartment="uVol";
  x_Pi_cyt.init.sbmlRole="speciesInitialAmount";
  x_GAP_cyt.amt.sbmlRole="speciesAmount";
  x_GAP_cyt.sbmlRole="speciesConcentration";
  x_GAP_cyt.sbmlCompartment="uVol";
  x_GAP_cyt.init.sbmlRole="speciesInitialAmount";
  G6P_ch.amt.sbmlRole="speciesAmount";
  G6P_ch.sbmlRole="speciesConcentration";
  G6P_ch.sbmlCompartment="uVol";
  G6P_ch.init.sbmlRole="speciesInitialAmount";
  x_NADP_ch.amt.sbmlRole="speciesAmount";
  x_NADP_ch.sbmlRole="speciesConcentration";
  x_NADP_ch.sbmlCompartment="uVol";
  x_NADP_ch.init.sbmlRole="speciesInitialAmount";
  x_PGA_cyt.amt.sbmlRole="speciesAmount";
  x_PGA_cyt.sbmlRole="speciesConcentration";
  x_PGA_cyt.sbmlCompartment="uVol";
  x_PGA_cyt.init.sbmlRole="speciesInitialAmount";
  ADP_ch.amt.sbmlRole="speciesAmount";
  ADP_ch.sbmlRole="speciesConcentration";
  ADP_ch.sbmlCompartment="uVol";
  ADP_ch.init.sbmlRole="speciesInitialAmount";
  x_DHAP_cyt.amt.sbmlRole="speciesAmount";
  x_DHAP_cyt.sbmlRole="speciesConcentration";
  x_DHAP_cyt.sbmlCompartment="uVol";
  x_DHAP_cyt.init.sbmlRole="speciesInitialAmount";
  x_Proton_ch.amt.sbmlRole="speciesAmount";
  x_Proton_ch.sbmlRole="speciesConcentration";
  x_Proton_ch.sbmlCompartment="uVol";
  x_Proton_ch.init.sbmlRole="speciesInitialAmount";
  G1P_ch.amt.sbmlRole="speciesAmount";
  G1P_ch.sbmlRole="speciesConcentration";
  G1P_ch.sbmlCompartment="uVol";
  G1P_ch.init.sbmlRole="speciesInitialAmount";
  x_Starch_ch.amt.sbmlRole="speciesAmount";
  x_Starch_ch.sbmlRole="speciesConcentration";
  x_Starch_ch.sbmlCompartment="uVol";
  x_Starch_ch.init.sbmlRole="speciesInitialAmount";
  J0.rate.sbmlRole="rate";
  Rbco_vm.sbmlRole="parameter";
  Rbco_km.sbmlRole="parameter";
  Rbco_KiPGA.sbmlRole="parameter";
  Rbco_KiFBP.sbmlRole="parameter";
  Rbco_KiSBP.sbmlRole="parameter";
  Rbco_KiPi.sbmlRole="parameter";
  Rbco_KiNADPH.sbmlRole="parameter";
  J1.rate.sbmlRole="rate";
  TPI_v.sbmlRole="parameter";
  q4.sbmlRole="parameter";
  J2.rate.sbmlRole="rate";
  F_Aldo_v.sbmlRole="parameter";
  q5.sbmlRole="parameter";
  J3.rate.sbmlRole="rate";
  F_TKL_v.sbmlRole="parameter";
  q7.sbmlRole="parameter";
  J4.rate.sbmlRole="rate";
  E_Aldo_v.sbmlRole="parameter";
  q8.sbmlRole="parameter";
  J5.rate.sbmlRole="rate";
  G_TKL_v.sbmlRole="parameter";
  q10.sbmlRole="parameter";
  J6.rate.sbmlRole="rate";
  R5Piso_v.sbmlRole="parameter";
  q11.sbmlRole="parameter";
  J7.rate.sbmlRole="rate";
  X5Pepi_v.sbmlRole="parameter";
  q12.sbmlRole="parameter";
  J8.rate.sbmlRole="rate";
  PGA_xpMult.sbmlRole="parameter";
  TP_Piap_vm.sbmlRole="parameter";
  TP_Piap_kPGA_ch.sbmlRole="parameter";
  TP_Piap_kPi_cyt.sbmlRole="parameter";
  TP_Piap_kPi_ch.sbmlRole="parameter";
  TP_Piap_kDHAP_ch.sbmlRole="parameter";
  TP_Piap_kGAP_ch.sbmlRole="parameter";
  J9.rate.sbmlRole="rate";
  J10.rate.sbmlRole="rate";
  PGI_v.sbmlRole="parameter";
  q14.sbmlRole="parameter";
  J11.rate.sbmlRole="rate";
  PGM_v.sbmlRole="parameter";
  q15.sbmlRole="parameter";
  J12.rate.sbmlRole="rate";
  LR_vm.sbmlRole="parameter";
  LR_kmADP.sbmlRole="parameter";
  LR_kmPi.sbmlRole="parameter";
  J13.rate.sbmlRole="rate";
  Ru5Pk_ch_vm.sbmlRole="parameter";
  Ru5Pk_ch_km1.sbmlRole="parameter";
  Ru5Pk_ch_KiPGA.sbmlRole="parameter";
  Ru5Pk_ch_KiRuBP.sbmlRole="parameter";
  Ru5Pk_ch_KiPi.sbmlRole="parameter";
  Ru5Pk_ch_KiADP1.sbmlRole="parameter";
  Ru5Pk_ch_km2.sbmlRole="parameter";
  Ru5Pk_ch_KiADP2.sbmlRole="parameter";
  J14.rate.sbmlRole="rate";
  PGK_v.sbmlRole="parameter";
  q2.sbmlRole="parameter";
  J15.rate.sbmlRole="rate";
  StSyn_vm.sbmlRole="parameter";
  stsyn_ch_km1.sbmlRole="parameter";
  stsyn_ch_Ki.sbmlRole="parameter";
  stsyn_ch_km2.sbmlRole="parameter";
  stsyn_ch_ka1.sbmlRole="parameter";
  stsyn_ch_ka2.sbmlRole="parameter";
  stsyn_ch_ka3.sbmlRole="parameter";
  J16.rate.sbmlRole="rate";
  StPase_Vm.sbmlRole="parameter";
  StPase_km.sbmlRole="parameter";
  StPase_kiG1P.sbmlRole="parameter";
  J17.rate.sbmlRole="rate";
  FBPase_ch_vm.sbmlRole="parameter";
  FBPase_ch_km.sbmlRole="parameter";
  FBPase_ch_KiF6P.sbmlRole="parameter";
  FBPase_ch_KiPi.sbmlRole="parameter";
  J18.rate.sbmlRole="rate";
  J19.rate.sbmlRole="rate";
  G3Pdh_v.sbmlRole="parameter";
  q3.sbmlRole="parameter";
  J20.rate.sbmlRole="rate";
  SBPase_ch_vm.sbmlRole="parameter";
  SBPase_ch_km.sbmlRole="parameter";
  SBPase_ch_KiPi.sbmlRole="parameter";
}