// This model generated automatically from SBML // unit definitions import nsrunit; unit conversion off; // SBML property definitions property sbmlRole=string; property sbmlName=string; property sbmlCompartment=string; // SBML reactions // v1: x => FN // v2: x => FN // v3: FRN1 => FN RN // v4: FN => SN // v5: FN => x // v6: FN RN => FRN1 // v7: SRN1 => SN RN // v8: SN => MN // v9: SN => x // v10: SN RN => SRN1 // v11: MN => MC // v12: MN => x // va13: SRN1 => MN RN // vb13: SRN2 => MN 2RN // vc13: SRN3 => MN 3RN // vd13: SRN4 => MN 4RN // ve13: SRN5 => MN 5RN // vf13: SRN6 => MN 6RN // vg13: SRN7 => MN 7RN // vh13: SRN8 => MN 8RN // vi13: SRN9 => MN 9RN // vj13: SRN10 => MN 10RN // vk13: SRN11 => MN 11RN // vl13: SRN12 => MN 12RN // va14: FRN1 => FC RC // vb14: FRN2 => FC 2RC // vc14: FRN3 => FC 3RC // vd14: FRN4 => FC 4RC // ve14: FRN5 => FC 5RC // vf14: FRN6 => FC 6RC // vg14: FRN7 => FC 7RC // vh14: FRN8 => FC 8RC // vi14: FRN9 => FC 9RC // vj14: FRN10 => FC 10RC // vk14: FRN11 => FC 11RC // vl14: FRN12 => FC 12RC // v15: FC => x // va16: SRN1 => SC RC // vb16: SRN2 => SC 2RC // vc16: SRN3 => SC 3RC // vd16: SRN4 => SC 4RC // ve16: SRN5 => SC 5RC // vf16: SRN6 => SC 6RC // vg16: SRN7 => SC 7RC // vh16: SRN8 => SC 8RC // vi16: SRN9 => SC 9RC // vj16: SRN10 => SC 10RC // vk16: SRN11 => SC 11RC // vl16: SRN12 => SC 12RC // v17: SC => x // v18: MC => x // va19: FRN1 RN => FRN2 // vb19: FRN2 RN => FRN3 // vc19: FRN3 RN => FRN4 // vd19: FRN4 RN => FRN5 // ve19: FRN5 RN => FRN6 // vf19: FRN6 RN => FRN7 // vg19: FRN7 RN => FRN8 // vh19: FRN8 RN => FRN9 // vi19: FRN9 RN => FRN10 // vj19: FRN10 RN => FRN11 // vk19: FRN11 RN => FRN12 // va20: FRN2 => FRN1 RN // vb20: FRN3 => FRN2 RN // vc20: FRN4 => FRN3 RN // vd20: FRN5 => FRN4 RN // ve20: FRN6 => FRN5 RN // vf20: FRN7 => FRN6 RN // vg20: FRN8 => FRN7 RN // vh20: FRN9 => FRN8 RN // vi20: FRN10 => FRN9 RN // vj20: FRN11 => FRN10 RN // vk20: FRN12 => FRN11 RN // va21: FRN1 => SRN1 // vb21: FRN2 => SRN2 // vc21: FRN3 => SRN3 // vd21: FRN4 => SRN4 // ve21: FRN5 => SRN5 // vf21: FRN6 => SRN6 // vg21: FRN7 => SRN7 // vh21: FRN8 => SRN8 // vi21: FRN9 => SRN9 // vj21: FRN10 => SRN10 // vk21: FRN11 => SRN11 // vl21: FRN12 => SRN12 // va22: FRN1 => RN // vb22: FRN2 => 2RN // vc22: FRN3 => 3RN // vd22: FRN4 => 4RN // ve22: FRN5 => 5RN // vf22: FRN6 => 6RN // vg22: FRN7 => 7RN // vh22: FRN8 => 8RN // vi22: FRN9 => 9RN // vj22: FRN10 => 10RN // vk22: FRN11 => 11RN // vl22: FRN12 => 12RN // va23: SRN1 RN => SRN2 // vb23: SRN2 RN => SRN3 // vc23: SRN3 RN => SRN4 // vd23: SRN4 RN => SRN5 // ve23: SRN5 RN => SRN6 // vf23: SRN6 RN => SRN7 // vg23: SRN7 RN => SRN8 // vh23: SRN8 RN => SRN9 // vi23: SRN9 RN => SRN10 // vj23: SRN10 RN => SRN11 // vk23: SRN11 RN => SRN12 // va24: SRN2 => SRN1 RN // vb24: SRN3 => SRN2 RN // vc24: SRN4 => SRN3 RN // vd24: SRN5 => SRN4 RN // ve24: SRN6 => SRN5 RN // vf24: SRN7 => SRN6 RN // vg24: SRN8 => SRN7 RN // vh24: SRN9 => SRN8 RN // vi24: SRN10 => SRN9 RN // vj24: SRN11 => SRN10 RN // vk24: SRN12 => SRN11 RN // va25: SRN1 => RN // vb25: SRN2 => 2RN // vc25: SRN3 => 3RN // vd25: SRN4 => 4RN // ve25: SRN5 => 5RN // vf25: SRN6 => 6RN // vg25: SRN7 => 7RN // vh25: SRN8 => 8RN // vi25: SRN9 => 9RN // vj25: SRN10 => 10RN // vk25: SRN11 => 11RN // vl25: SRN12 => 12RN // v26: x => RC // v27: RN => RC // v28: RC => RN // v29: RC => x // v30: x => TC // v31: x => TC // v32: TN => TC // v33: TC => TN // v34: TC => x // v35: RN => x // v36: TN => x math main { realDomain time second; time.min=0; extern time.max; extern time.delta; // variable definitions real compartment = 1 L; real VolNTCell(time); real NMolarity(time); real NCFactor(time); real NumMolecules = 1; real PV = 1; real Tcb = .25; real Tcadd = 24.75; real KTat = 28.57; real kd1 = 3E-5; real kd2 = .038; real kd3 = .038; real kd4 = .038; real kd5 = .038; real kd6 = .038; real kd7 = .038; real kd8 = .038; real kd9 = .038; real kd10 = .038; real kd11 = .038; real kd12 = .038; real kFsp = 2.5; real kSsp = 2.5; real kRNAdegN = .0029; real kRNAdegC = .0029; real ka1 = 2.5E5; real ka2 = 4.4E5; real ka3 = 4.4E5; real ka4 = 4.4E5; real ka5 = 4.4E5; real ka6 = 4.4E5; real ka7 = 4.4E5; real ka8 = 4.4E5; real ka9 = 4.4E5; real ka10 = 4.4E5; real ka11 = 4.4E5; real ka12 = 4.4E5; real kMexp = .0347; real kRexp = .0347; real kTexp = .0347; real kFexp1 = 0; real kFexp2 = 0; real kFexp3 = 0; real kFexp4 = 0; real kFexp5 = 0; real kFexp6 = 0; real kFexp7 = .0347; real kFexp8 = .0347; real kFexp9 = .0347; real kFexp10 = .0347; real kFexp11 = .0347; real kFexp12 = .0347; real kSexp1 = 0; real kSexp2 = 0; real kSexp3 = 0; real kSexp4 = 0; real kSexp5 = 0; real kSexp6 = 0; real kSexp7 = .0347; real kSexp8 = .0347; real kSexp9 = .0347; real kSexp10 = .0347; real kSexp11 = .0347; real kSexp12 = .0347; real dS1 = .8; real dS2 = .8; real dS3 = .8; real dS4 = .8; real dS5 = .8; real dS6 = .8; real dS7 = .8; real dS8 = .8; real dS9 = .8; real dS10 = .8; real dS11 = .8; real dS12 = .8; real dF1 = .8; real dF2 = .8; real dF3 = .8; real dF4 = .8; real dF5 = .8; real dF6 = .8; real dF7 = .8; real dF8 = .8; real dF9 = .8; real dF10 = .8; real dF11 = .8; real dF12 = .8; real fRev = .5; real Trr = 4.5; real fMrev = .19; real kRimp = .347; real kTimp = .347; real fTat = 1; real fStat = .05; real fMtat = .05; real kProdegC = .1733; real kProdegN = .0433; real x = 0 M; real FN(time) M; real FRN1(time) M; real RN(time) M; real SN(time) M; real SRN1(time) M; real MN(time) M; real MC(time) M; real SRN2(time) M; real SRN3(time) M; real SRN4(time) M; real SRN5(time) M; real SRN6(time) M; real SRN7(time) M; real SRN8(time) M; real SRN9(time) M; real SRN10(time) M; real SRN11(time) M; real SRN12(time) M; real FC(time) M; real RC(time) M; real FRN2(time) M; real FRN3(time) M; real FRN4(time) M; real FRN5(time) M; real FRN6(time) M; real FRN7(time) M; real FRN8(time) M; real FRN9(time) M; real FRN10(time) M; real FRN11(time) M; real FRN12(time) M; real SC(time) M; real TC(time) M; real TN(time) M; real v1(time) katal; real v2(time) katal; real v3(time) katal; real v4(time) katal; real v5(time) katal; real v6(time) katal; real v7(time) katal; real v8(time) katal; real v9(time) katal; real v10(time) katal; real v11(time) katal; real v12(time) katal; real va13(time) katal; real vb13(time) katal; real vc13(time) katal; real vd13(time) katal; real ve13(time) katal; real vf13(time) katal; real vg13(time) katal; real vh13(time) katal; real vi13(time) katal; real vj13(time) katal; real vk13(time) katal; real vl13(time) katal; real va14(time) katal; real vb14(time) katal; real vc14(time) katal; real vd14(time) katal; real ve14(time) katal; real vf14(time) katal; real vg14(time) katal; real vh14(time) katal; real vi14(time) katal; real vj14(time) katal; real vk14(time) katal; real vl14(time) katal; real v15(time) katal; real va16(time) katal; real vb16(time) katal; real vc16(time) katal; real vd16(time) katal; real ve16(time) katal; real vf16(time) katal; real vg16(time) katal; real vh16(time) katal; real vi16(time) katal; real vj16(time) katal; real vk16(time) katal; real vl16(time) katal; real v17(time) katal; real v18(time) katal; real va19(time) katal; real vb19(time) katal; real vc19(time) katal; real vd19(time) katal; real ve19(time) katal; real vf19(time) katal; real vg19(time) katal; real vh19(time) katal; real vi19(time) katal; real vj19(time) katal; real vk19(time) katal; real va20(time) katal; real vb20(time) katal; real vc20(time) katal; real vd20(time) katal; real ve20(time) katal; real vf20(time) katal; real vg20(time) katal; real vh20(time) katal; real vi20(time) katal; real vj20(time) katal; real vk20(time) katal; real va21(time) katal; real vb21(time) katal; real vc21(time) katal; real vd21(time) katal; real ve21(time) katal; real vf21(time) katal; real vg21(time) katal; real vh21(time) katal; real vi21(time) katal; real vj21(time) katal; real vk21(time) katal; real vl21(time) katal; real va22(time) katal; real vb22(time) katal; real vc22(time) katal; real vd22(time) katal; real ve22(time) katal; real vf22(time) katal; real vg22(time) katal; real vh22(time) katal; real vi22(time) katal; real vj22(time) katal; real vk22(time) katal; real vl22(time) katal; real va23(time) katal; real vb23(time) katal; real vc23(time) katal; real vd23(time) katal; real ve23(time) katal; real vf23(time) katal; real vg23(time) katal; real vh23(time) katal; real vi23(time) katal; real vj23(time) katal; real vk23(time) katal; real va24(time) katal; real vb24(time) katal; real vc24(time) katal; real vd24(time) katal; real ve24(time) katal; real vf24(time) katal; real vg24(time) katal; real vh24(time) katal; real vi24(time) katal; real vj24(time) katal; real vk24(time) katal; real va25(time) katal; real vb25(time) katal; real vc25(time) katal; real vd25(time) katal; real ve25(time) katal; real vf25(time) katal; real vg25(time) katal; real vh25(time) katal; real vi25(time) katal; real vj25(time) katal; real vk25(time) katal; real vl25(time) katal; real v26(time) katal; real v27(time) katal; real v28(time) katal; real v29(time) katal; real v30(time) katal; real v31(time) katal; real v32(time) katal; real v33(time) katal; real v34(time) katal; real v35(time) katal; real v36(time) katal; // equations VolNTCell = 4/3*3.141592653589793*(6*10^(-6)/2)^3*10^3; NMolarity = NumMolecules/VolNTCell*(1/6.02)*10^(-23); NCFactor = NMolarity*10^6; when (time=time.min) FN = 0; FN:time = (v1 + v2 + v3 + -1*v4 + -1*v5 + -1*v6)/compartment; when (time=time.min) FRN1 = 0; FRN1:time = (-1*v3 + v6 + -1*va14 + -1*va19 + va20 + -1*va21 + -1*va22)/compartment; when (time=time.min) RN = 0; RN:time = (v3 + -1*v6 + v7 + -1*v10 + va13 + 2*vb13 + 3*vc13 + 4*vd13 + 5*ve13 + 6*vf13 + 7*vg13 + 8*vh13 + 9*vi13 + 10*vj13 + 11*vk13 + 12*vl13 + -1*va19 + -1*vb19 + -1*vc19 + -1*vd19 + -1*ve19 + -1*vf19 + -1*vg19 + -1*vh19 + -1*vi19 + -1*vj19 + -1*vk19 + va20 + vb20 + vc20 + vd20 + ve20 + vf20 + vg20 + vh20 + vi20 + vj20 + vk20 + va22 + 2*vb22 + 3*vc22 + 4*vd22 + 5*ve22 + 6*vf22 + 7*vg22 + 8*vh22 + 9*vi22 + 10*vj22 + 11*vk22 + 12*vl22 + -1*va23 + -1*vb23 + -1*vc23 + -1*vd23 + -1*ve23 + -1*vf23 + -1*vg23 + -1*vh23 + -1*vi23 + -1*vj23 + -1*vk23 + va24 + vb24 + vc24 + vd24 + ve24 + vf24 + vg24 + vh24 + vi24 + vj24 + vk24 + va25 + 2*vb25 + 3*vc25 + 4*vd25 + 5*ve25 + 6*vf25 + 7*vg25 + 8*vh25 + 9*vi25 + 10*vj25 + 11*vk25 + 12*vl25 + -1*v27 + v28 + -1*v35)/compartment; when (time=time.min) SN = 0; SN:time = (v4 + v7 + -1*v8 + -1*v9 + -1*v10)/compartment; when (time=time.min) SRN1 = 0; SRN1:time = (-1*v7 + v10 + -1*va13 + -1*va16 + va21 + -1*va23 + va24 + -1*va25)/compartment; when (time=time.min) MN = 0; MN:time = (v8 + -1*v11 + -1*v12 + va13 + vb13 + vc13 + vd13 + ve13 + vf13 + vg13 + vh13 + vi13 + vj13 + vk13 + vl13)/compartment; when (time=time.min) MC = 0; MC:time = (v11 + -1*v18)/compartment; when (time=time.min) SRN2 = 0; SRN2:time = (-1*vb13 + -1*vb16 + vb21 + va23 + -1*vb23 + -1*va24 + vb24 + -1*vb25)/compartment; when (time=time.min) SRN3 = 0; SRN3:time = (-1*vc13 + -1*vc16 + vc21 + vb23 + -1*vc23 + -1*vb24 + vc24 + -1*vc25)/compartment; when (time=time.min) SRN4 = 0; SRN4:time = (-1*vd13 + -1*vd16 + vd21 + vc23 + -1*vd23 + -1*vc24 + vd24 + -1*vd25)/compartment; when (time=time.min) SRN5 = 0; SRN5:time = (-1*ve13 + -1*ve16 + ve21 + vd23 + -1*ve23 + -1*vd24 + ve24 + -1*ve25)/compartment; when (time=time.min) SRN6 = 0; SRN6:time = (-1*vf13 + -1*vf16 + vf21 + ve23 + -1*vf23 + -1*ve24 + vf24 + -1*vf25)/compartment; when (time=time.min) SRN7 = 0; SRN7:time = (-1*vg13 + -1*vg16 + vg21 + vf23 + -1*vg23 + -1*vf24 + vg24 + -1*vg25)/compartment; when (time=time.min) SRN8 = 0; SRN8:time = (-1*vh13 + -1*vh16 + vh21 + vg23 + -1*vh23 + -1*vg24 + vh24 + -1*vh25)/compartment; when (time=time.min) SRN9 = 0; SRN9:time = (-1*vi13 + -1*vi16 + vi21 + vh23 + -1*vi23 + -1*vh24 + vi24 + -1*vi25)/compartment; when (time=time.min) SRN10 = 0; SRN10:time = (-1*vj13 + -1*vj16 + vj21 + vi23 + -1*vj23 + -1*vi24 + vj24 + -1*vj25)/compartment; when (time=time.min) SRN11 = 0; SRN11:time = (-1*vk13 + -1*vk16 + vk21 + vj23 + -1*vk23 + -1*vj24 + vk24 + -1*vk25)/compartment; when (time=time.min) SRN12 = 0; SRN12:time = (-1*vl13 + -1*vl16 + vl21 + vk23 + -1*vk24 + -1*vl25)/compartment; when (time=time.min) FC = 0; FC:time = (va14 + vb14 + vc14 + vd14 + ve14 + vf14 + vg14 + vh14 + vi14 + vj14 + vk14 + vl14 + -1*v15)/compartment; when (time=time.min) RC = 0; RC:time = (va14 + 2*vb14 + 3*vc14 + 4*vd14 + 5*ve14 + 6*vf14 + 7*vg14 + 8*vh14 + 9*vi14 + 10*vj14 + 11*vk14 + 12*vl14 + va16 + 2*vb16 + 3*vc16 + 4*vd16 + 5*ve16 + 6*vf16 + 7*vg16 + 8*vh16 + 9*vi16 + 10*vj16 + 11*vk16 + 12*vl16 + v26 + v27 + -1*v28 + -1*v29)/compartment; when (time=time.min) FRN2 = 0; FRN2:time = (-1*vb14 + va19 + -1*vb19 + -1*va20 + vb20 + -1*vb21 + -1*vb22)/compartment; when (time=time.min) FRN3 = 0; FRN3:time = (-1*vc14 + vb19 + -1*vc19 + -1*vb20 + vc20 + -1*vc21 + -1*vc22)/compartment; when (time=time.min) FRN4 = 0; FRN4:time = (-1*vd14 + vc19 + -1*vd19 + -1*vc20 + vd20 + -1*vd21 + -1*vd22)/compartment; when (time=time.min) FRN5 = 0; FRN5:time = (-1*ve14 + vd19 + -1*ve19 + -1*vd20 + ve20 + -1*ve21 + -1*ve22)/compartment; when (time=time.min) FRN6 = 0; FRN6:time = (-1*vf14 + ve19 + -1*vf19 + -1*ve20 + vf20 + -1*vf21 + -1*vf22)/compartment; when (time=time.min) FRN7 = 0; FRN7:time = (-1*vg14 + vf19 + -1*vg19 + -1*vf20 + vg20 + -1*vg21 + -1*vg22)/compartment; when (time=time.min) FRN8 = 0; FRN8:time = (-1*vh14 + vg19 + -1*vh19 + -1*vg20 + vh20 + -1*vh21 + -1*vh22)/compartment; when (time=time.min) FRN9 = 0; FRN9:time = (-1*vi14 + vh19 + -1*vi19 + -1*vh20 + vi20 + -1*vi21 + -1*vi22)/compartment; when (time=time.min) FRN10 = 0; FRN10:time = (-1*vj14 + vi19 + -1*vj19 + -1*vi20 + vj20 + -1*vj21 + -1*vj22)/compartment; when (time=time.min) FRN11 = 0; FRN11:time = (-1*vk14 + vj19 + -1*vk19 + -1*vj20 + vk20 + -1*vk21 + -1*vk22)/compartment; when (time=time.min) FRN12 = 0; FRN12:time = (-1*vl14 + vk19 + -1*vk20 + -1*vl21 + -1*vl22)/compartment; when (time=time.min) SC = 0; SC:time = (va16 + vb16 + vc16 + vd16 + ve16 + vf16 + vg16 + vh16 + vi16 + vj16 + vk16 + vl16 + -1*v17)/compartment; when (time=time.min) TC = 0; TC:time = (v30 + v31 + v32 + -1*v33 + -1*v34)/compartment; when (time=time.min) TN = 0; TN:time = (-1*v32 + v33 + -1*v36)/compartment; v1 = Tcb*PV; v2 = Tcadd*PV*KTat*TN*NCFactor/(1+KTat*TN*NCFactor); v3 = kd1*60*FRN1; v4 = kFsp/60*FN; v5 = kRNAdegN*FN; v6 = ka1*NMolarity*60*RN*FN; v7 = kd1*60*SRN1; v8 = kSsp/60*SN; v9 = kRNAdegN*SN; v10 = ka1*NMolarity*60*RN*SN; v11 = kMexp*MN; v12 = kRNAdegN*MN; va13 = (1-dS1)*kSsp/60*SRN1; vb13 = (1-dS2)*kSsp/60*SRN2; vc13 = (1-dS3)*kSsp/60*SRN3; vd13 = (1-dS4)*kSsp/60*SRN4; ve13 = (1-dS5)*kSsp/60*SRN5; vf13 = (1-dS6)*kSsp/60*SRN6; vg13 = (1-dS7)*kSsp/60*SRN7; vh13 = (1-dS8)*kSsp/60*SRN8; vi13 = (1-dS9)*kSsp/60*SRN9; vj13 = (1-dS10)*kSsp/60*SRN10; vk13 = (1-dS11)*kSsp/60*SRN11; vl13 = (1-dS12)*kSsp/60*SRN12; va14 = kFexp1*FRN1; vb14 = kFexp2*FRN2; vc14 = kFexp3*FRN3; vd14 = kFexp4*FRN4; ve14 = kFexp5*FRN5; vf14 = kFexp6*FRN6; vg14 = kFexp7*FRN7; vh14 = kFexp8*FRN8; vi14 = kFexp9*FRN9; vj14 = kFexp10*FRN10; vk14 = kFexp11*FRN11; vl14 = kFexp12*FRN12; v15 = kRNAdegC*FC; va16 = kFexp1*SRN1; vb16 = kFexp2*SRN2; vc16 = kFexp3*SRN3; vd16 = kFexp4*SRN4; ve16 = kFexp5*SRN5; vf16 = kFexp6*SRN6; vg16 = kFexp7*SRN7; vh16 = kFexp8*SRN8; vi16 = kFexp9*SRN9; vj16 = kFexp10*SRN10; vk16 = kFexp11*SRN11; vl16 = kFexp12*SRN12; v17 = kRNAdegC*SC; v18 = kRNAdegC*MC; va19 = ka2*NMolarity*60*RN*FRN1; vb19 = ka3*NMolarity*60*RN*FRN2; vc19 = ka4*NMolarity*60*RN*FRN3; vd19 = ka5*NMolarity*60*RN*FRN4; ve19 = ka6*NMolarity*60*RN*FRN5; vf19 = ka7*NMolarity*60*RN*FRN6; vg19 = ka8*NMolarity*60*RN*FRN7; vh19 = ka9*NMolarity*60*RN*FRN8; vi19 = ka10*NMolarity*60*RN*FRN9; vj19 = ka11*NMolarity*60*RN*FRN10; vk19 = ka12*NMolarity*60*RN*FRN11; va20 = kd2*60*FRN2; vb20 = kd3*60*FRN3; vc20 = kd4*60*FRN4; vd20 = kd5*60*FRN5; ve20 = kd6*60*FRN6; vf20 = kd7*60*FRN7; vg20 = kd8*60*FRN8; vh20 = kd9*60*FRN9; vi20 = kd10*60*FRN10; vj20 = kd11*60*FRN11; vk20 = kd12*60*FRN12; va21 = (1-dF1)*kFsp/60*FRN1; vb21 = (1-dF2)*kFsp/60*FRN2; vc21 = (1-dF3)*kFsp/60*FRN3; vd21 = (1-dF4)*kFsp/60*FRN4; ve21 = (1-dF5)*kFsp/60*FRN5; vf21 = (1-dF6)*kFsp/60*FRN6; vg21 = (1-dF7)*kFsp/60*FRN7; vh21 = (1-dF8)*kFsp/60*FRN8; vi21 = (1-dF9)*kFsp/60*FRN9; vj21 = (1-dF10)*kFsp/60*FRN10; vk21 = (1-dF11)*kFsp/60*FRN11; vl21 = (1-dF11)*kFsp/60*FRN12; va22 = kRNAdegN*FRN1; vb22 = kRNAdegN*FRN2; vc22 = kRNAdegN*FRN3; vd22 = kRNAdegN*FRN4; ve22 = kRNAdegN*FRN5; vf22 = kRNAdegN*FRN6; vg22 = kRNAdegN*FRN7; vh22 = kRNAdegN*FRN8; vi22 = kRNAdegN*FRN9; vj22 = kRNAdegN*FRN10; vk22 = kRNAdegN*FRN11; vl22 = kRNAdegN*FRN12; va23 = ka2*NMolarity*60*RN*SRN1; vb23 = ka3*NMolarity*60*RN*SRN2; vc23 = ka4*NMolarity*60*RN*SRN3; vd23 = ka5*NMolarity*60*RN*SRN4; ve23 = ka6*NMolarity*60*RN*SRN5; vf23 = ka7*NMolarity*60*RN*SRN6; vg23 = ka8*NMolarity*60*RN*SRN7; vh23 = ka9*NMolarity*60*RN*SRN8; vi23 = ka10*NMolarity*60*RN*SRN9; vj23 = ka11*NMolarity*60*RN*SRN10; vk23 = ka12*NMolarity*60*RN*SRN11; va24 = kd2*60*SRN2; vb24 = kd3*60*SRN3; vc24 = kd4*1.5*60*SRN4; vd24 = kd5*1.5*60*SRN5; ve24 = kd6*1.5*60*SRN6; vf24 = kd7*1.5*60*SRN7; vg24 = kd8*1.5*60*SRN8; vh24 = kd9*1.5*60*SRN9; vi24 = kd10*1.5*60*SRN10; vj24 = kd11*1.5*60*SRN11; vk24 = kd12*1.5*60*SRN12; va25 = kRNAdegN*SRN1; vb25 = kRNAdegN*SRN2; vc25 = kRNAdegN*SRN3; vd25 = kRNAdegN*SRN4; ve25 = kRNAdegN*SRN5; vf25 = kRNAdegN*SRN6; vg25 = kRNAdegN*SRN7; vh25 = kRNAdegN*SRN8; vi25 = kRNAdegN*SRN9; vj25 = kRNAdegN*SRN10; vk25 = kRNAdegN*SRN11; vl25 = kRNAdegN*SRN12; v26 = fRev*Trr*fMrev*MC; v27 = kRexp*RN; v28 = kRimp*RC; v29 = kProdegC/60*RC; v30 = fTat*Trr*fStat*SC; v31 = fTat*Trr*fMtat*MC; v32 = kTexp*TN; v33 = kTimp*TC; v34 = kProdegC/60*TC; v35 = kProdegN/60*RN; v36 = kProdegN/60*TN; // variable properties compartment.sbmlRole="compartment"; VolNTCell.sbmlRole="parameter"; NMolarity.sbmlRole="parameter"; NCFactor.sbmlRole="parameter"; NumMolecules.sbmlRole="parameter"; PV.sbmlRole="parameter"; Tcb.sbmlRole="parameter"; Tcadd.sbmlRole="parameter"; KTat.sbmlRole="parameter"; kd1.sbmlRole="parameter"; kd2.sbmlRole="parameter"; kd3.sbmlRole="parameter"; kd4.sbmlRole="parameter"; kd5.sbmlRole="parameter"; kd6.sbmlRole="parameter"; kd7.sbmlRole="parameter"; kd8.sbmlRole="parameter"; kd9.sbmlRole="parameter"; kd10.sbmlRole="parameter"; kd11.sbmlRole="parameter"; kd12.sbmlRole="parameter"; kFsp.sbmlRole="parameter"; kSsp.sbmlRole="parameter"; kRNAdegN.sbmlRole="parameter"; kRNAdegC.sbmlRole="parameter"; ka1.sbmlRole="parameter"; ka2.sbmlRole="parameter"; ka3.sbmlRole="parameter"; ka4.sbmlRole="parameter"; ka5.sbmlRole="parameter"; ka6.sbmlRole="parameter"; ka7.sbmlRole="parameter"; ka8.sbmlRole="parameter"; ka9.sbmlRole="parameter"; ka10.sbmlRole="parameter"; ka11.sbmlRole="parameter"; ka12.sbmlRole="parameter"; kMexp.sbmlRole="parameter"; kRexp.sbmlRole="parameter"; kTexp.sbmlRole="parameter"; kFexp1.sbmlRole="parameter"; kFexp2.sbmlRole="parameter"; kFexp3.sbmlRole="parameter"; kFexp4.sbmlRole="parameter"; kFexp5.sbmlRole="parameter"; kFexp6.sbmlRole="parameter"; kFexp7.sbmlRole="parameter"; kFexp8.sbmlRole="parameter"; kFexp9.sbmlRole="parameter"; kFexp10.sbmlRole="parameter"; kFexp11.sbmlRole="parameter"; kFexp12.sbmlRole="parameter"; kSexp1.sbmlRole="parameter"; kSexp2.sbmlRole="parameter"; kSexp3.sbmlRole="parameter"; kSexp4.sbmlRole="parameter"; kSexp5.sbmlRole="parameter"; kSexp6.sbmlRole="parameter"; kSexp7.sbmlRole="parameter"; kSexp8.sbmlRole="parameter"; kSexp9.sbmlRole="parameter"; kSexp10.sbmlRole="parameter"; kSexp11.sbmlRole="parameter"; kSexp12.sbmlRole="parameter"; dS1.sbmlRole="parameter"; dS2.sbmlRole="parameter"; dS3.sbmlRole="parameter"; dS4.sbmlRole="parameter"; dS5.sbmlRole="parameter"; dS6.sbmlRole="parameter"; dS7.sbmlRole="parameter"; dS8.sbmlRole="parameter"; dS9.sbmlRole="parameter"; dS10.sbmlRole="parameter"; dS11.sbmlRole="parameter"; dS12.sbmlRole="parameter"; dF1.sbmlRole="parameter"; dF2.sbmlRole="parameter"; dF3.sbmlRole="parameter"; dF4.sbmlRole="parameter"; dF5.sbmlRole="parameter"; dF6.sbmlRole="parameter"; dF7.sbmlRole="parameter"; dF8.sbmlRole="parameter"; dF9.sbmlRole="parameter"; dF10.sbmlRole="parameter"; dF11.sbmlRole="parameter"; dF12.sbmlRole="parameter"; fRev.sbmlRole="parameter"; Trr.sbmlRole="parameter"; fMrev.sbmlRole="parameter"; kRimp.sbmlRole="parameter"; kTimp.sbmlRole="parameter"; fTat.sbmlRole="parameter"; fStat.sbmlRole="parameter"; fMtat.sbmlRole="parameter"; kProdegC.sbmlRole="parameter"; kProdegN.sbmlRole="parameter"; x.sbmlRole="species"; x.sbmlCompartment="compartment"; FN.sbmlRole="species"; FN.sbmlCompartment="compartment"; FRN1.sbmlRole="species"; FRN1.sbmlCompartment="compartment"; RN.sbmlRole="species"; RN.sbmlCompartment="compartment"; SN.sbmlRole="species"; SN.sbmlCompartment="compartment"; SRN1.sbmlRole="species"; SRN1.sbmlCompartment="compartment"; MN.sbmlRole="species"; MN.sbmlCompartment="compartment"; MC.sbmlRole="species"; MC.sbmlCompartment="compartment"; SRN2.sbmlRole="species"; SRN2.sbmlCompartment="compartment"; SRN3.sbmlRole="species"; SRN3.sbmlCompartment="compartment"; SRN4.sbmlRole="species"; SRN4.sbmlCompartment="compartment"; SRN5.sbmlRole="species"; SRN5.sbmlCompartment="compartment"; SRN6.sbmlRole="species"; SRN6.sbmlCompartment="compartment"; SRN7.sbmlRole="species"; SRN7.sbmlCompartment="compartment"; SRN8.sbmlRole="species"; SRN8.sbmlCompartment="compartment"; SRN9.sbmlRole="species"; SRN9.sbmlCompartment="compartment"; SRN10.sbmlRole="species"; SRN10.sbmlCompartment="compartment"; SRN11.sbmlRole="species"; SRN11.sbmlCompartment="compartment"; SRN12.sbmlRole="species"; SRN12.sbmlCompartment="compartment"; FC.sbmlRole="species"; FC.sbmlCompartment="compartment"; RC.sbmlRole="species"; RC.sbmlCompartment="compartment"; FRN2.sbmlRole="species"; FRN2.sbmlCompartment="compartment"; FRN3.sbmlRole="species"; FRN3.sbmlCompartment="compartment"; FRN4.sbmlRole="species"; FRN4.sbmlCompartment="compartment"; FRN5.sbmlRole="species"; FRN5.sbmlCompartment="compartment"; FRN6.sbmlRole="species"; FRN6.sbmlCompartment="compartment"; FRN7.sbmlRole="species"; FRN7.sbmlCompartment="compartment"; FRN8.sbmlRole="species"; FRN8.sbmlCompartment="compartment"; FRN9.sbmlRole="species"; FRN9.sbmlCompartment="compartment"; FRN10.sbmlRole="species"; FRN10.sbmlCompartment="compartment"; FRN11.sbmlRole="species"; FRN11.sbmlCompartment="compartment"; FRN12.sbmlRole="species"; FRN12.sbmlCompartment="compartment"; SC.sbmlRole="species"; SC.sbmlCompartment="compartment"; TC.sbmlRole="species"; TC.sbmlCompartment="compartment"; TN.sbmlRole="species"; TN.sbmlCompartment="compartment"; v1.sbmlRole="rate"; v2.sbmlRole="rate"; v3.sbmlRole="rate"; v4.sbmlRole="rate"; v5.sbmlRole="rate"; v6.sbmlRole="rate"; v7.sbmlRole="rate"; v8.sbmlRole="rate"; v9.sbmlRole="rate"; v10.sbmlRole="rate"; v11.sbmlRole="rate"; v12.sbmlRole="rate"; va13.sbmlRole="rate"; vb13.sbmlRole="rate"; vc13.sbmlRole="rate"; vd13.sbmlRole="rate"; ve13.sbmlRole="rate"; vf13.sbmlRole="rate"; vg13.sbmlRole="rate"; vh13.sbmlRole="rate"; vi13.sbmlRole="rate"; vj13.sbmlRole="rate"; vk13.sbmlRole="rate"; vl13.sbmlRole="rate"; va14.sbmlRole="rate"; vb14.sbmlRole="rate"; vc14.sbmlRole="rate"; vd14.sbmlRole="rate"; ve14.sbmlRole="rate"; vf14.sbmlRole="rate"; vg14.sbmlRole="rate"; vh14.sbmlRole="rate"; vi14.sbmlRole="rate"; vj14.sbmlRole="rate"; vk14.sbmlRole="rate"; vl14.sbmlRole="rate"; v15.sbmlRole="rate"; va16.sbmlRole="rate"; vb16.sbmlRole="rate"; vc16.sbmlRole="rate"; vd16.sbmlRole="rate"; ve16.sbmlRole="rate"; vf16.sbmlRole="rate"; vg16.sbmlRole="rate"; vh16.sbmlRole="rate"; vi16.sbmlRole="rate"; vj16.sbmlRole="rate"; vk16.sbmlRole="rate"; vl16.sbmlRole="rate"; v17.sbmlRole="rate"; v18.sbmlRole="rate"; va19.sbmlRole="rate"; vb19.sbmlRole="rate"; vc19.sbmlRole="rate"; vd19.sbmlRole="rate"; ve19.sbmlRole="rate"; vf19.sbmlRole="rate"; vg19.sbmlRole="rate"; vh19.sbmlRole="rate"; vi19.sbmlRole="rate"; vj19.sbmlRole="rate"; vk19.sbmlRole="rate"; va20.sbmlRole="rate"; vb20.sbmlRole="rate"; vc20.sbmlRole="rate"; vd20.sbmlRole="rate"; ve20.sbmlRole="rate"; vf20.sbmlRole="rate"; vg20.sbmlRole="rate"; vh20.sbmlRole="rate"; vi20.sbmlRole="rate"; vj20.sbmlRole="rate"; vk20.sbmlRole="rate"; va21.sbmlRole="rate"; vb21.sbmlRole="rate"; vc21.sbmlRole="rate"; vd21.sbmlRole="rate"; ve21.sbmlRole="rate"; vf21.sbmlRole="rate"; vg21.sbmlRole="rate"; vh21.sbmlRole="rate"; vi21.sbmlRole="rate"; vj21.sbmlRole="rate"; vk21.sbmlRole="rate"; vl21.sbmlRole="rate"; va22.sbmlRole="rate"; vb22.sbmlRole="rate"; vc22.sbmlRole="rate"; vd22.sbmlRole="rate"; ve22.sbmlRole="rate"; vf22.sbmlRole="rate"; vg22.sbmlRole="rate"; vh22.sbmlRole="rate"; vi22.sbmlRole="rate"; vj22.sbmlRole="rate"; vk22.sbmlRole="rate"; vl22.sbmlRole="rate"; va23.sbmlRole="rate"; vb23.sbmlRole="rate"; vc23.sbmlRole="rate"; vd23.sbmlRole="rate"; ve23.sbmlRole="rate"; vf23.sbmlRole="rate"; vg23.sbmlRole="rate"; vh23.sbmlRole="rate"; vi23.sbmlRole="rate"; vj23.sbmlRole="rate"; vk23.sbmlRole="rate"; va24.sbmlRole="rate"; vb24.sbmlRole="rate"; vc24.sbmlRole="rate"; vd24.sbmlRole="rate"; ve24.sbmlRole="rate"; vf24.sbmlRole="rate"; vg24.sbmlRole="rate"; vh24.sbmlRole="rate"; vi24.sbmlRole="rate"; vj24.sbmlRole="rate"; vk24.sbmlRole="rate"; va25.sbmlRole="rate"; vb25.sbmlRole="rate"; vc25.sbmlRole="rate"; vd25.sbmlRole="rate"; ve25.sbmlRole="rate"; vf25.sbmlRole="rate"; vg25.sbmlRole="rate"; vh25.sbmlRole="rate"; vi25.sbmlRole="rate"; vj25.sbmlRole="rate"; vk25.sbmlRole="rate"; vl25.sbmlRole="rate"; v26.sbmlRole="rate"; v27.sbmlRole="rate"; v28.sbmlRole="rate"; v29.sbmlRole="rate"; v30.sbmlRole="rate"; v31.sbmlRole="rate"; v32.sbmlRole="rate"; v33.sbmlRole="rate"; v34.sbmlRole="rate"; v35.sbmlRole="rate"; v36.sbmlRole="rate"; }