// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R04809: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA <=> space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA 
// R04813: space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA <=> space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA 
// R04506: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al <=> space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate 
// R04805: space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane <=> space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E4_space_2_space_1_space_minus_ = 0 M;
  real E1_space_1_space_1_space_1 = 0 M;
  real E1_space_2_space_1_space_3 = 0 M;
  real space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA(time) M;
  real R04809(time) katal;
  extern real R04809.kf;
  extern real R04809.kb;
  real R04813(time) katal;
  extern real R04813.kf;
  extern real R04813.kb;
  real R04506(time) katal;
  extern real R04506.kf;
  extern real R04506.kb;
  real R04805(time) katal;
  extern real R04805.kf;
  extern real R04805.kb;

  // equations
  when (time=time.min) space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA:time = (-1*R04813)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA:time = (R04813)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane = 0;
  space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane:time = (-1*R04805)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al:time = (-1*R04506 + R04805)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate:time = (R04506)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA:time = (-1*R04809)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA:time = (R04809)/uVol;
  R04809 = R04809.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA - R04809.kb*space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA;
  R04813 = R04813.kf*space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA - R04813.kb*space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA;
  R04506 = R04506.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al - R04506.kb*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate;
  R04805 = R04805.kf*space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane - R04805.kb*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E4_space_2_space_1_space_minus_.sbmlRole="species";
  E4_space_2_space_1_space_minus_.sbmlCompartment="uVol";
  E1_space_1_space_1_space_1.sbmlRole="species";
  E1_space_1_space_1_space_1.sbmlCompartment="uVol";
  E1_space_2_space_1_space_3.sbmlRole="species";
  E1_space_2_space_1_space_3.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlCompartment="uVol";
  R04809.sbmlRole="rate";
  R04809.kf.sbmlRole="rate";
  R04809.kb.sbmlRole="rate";
  R04813.sbmlRole="rate";
  R04813.kf.sbmlRole="rate";
  R04813.kb.sbmlRole="rate";
  R04506.sbmlRole="rate";
  R04506.kf.sbmlRole="rate";
  R04506.kb.sbmlRole="rate";
  R04805.sbmlRole="rate";
  R04805.kf.sbmlRole="rate";
  R04805.kb.sbmlRole="rate";
}