// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R04811: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA <=> Chenodeoxyglycocholoyl_minus_CoA 
// R04809: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA <=> space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA 
// R04547: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA <=> space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA 
// R04592: space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA <=> space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA 
// R04812: space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA => space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA 
// R04813: space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA <=> space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA 
// R01462: Cholesterol <=> Cholesterol_space_ester 
// R03719: space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA <=> Choloyl_minus_CoA 
// R04506: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al <=> space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate 
// R04805: space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane <=> space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al 
// R04546: space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA <=> Chenodeoxycholoyl_minus_CoA 
// R04810: space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA <=> space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E4_space_2_space_1_space_minus_ = 0 M;
  real E1_space_1_space_1_space_minus_ = 0 M;
  real E1_space_3_space_99_space_minus_ = 0 M;
  real E2_space_3_space_1_space_16 = 0 M;
  real E3_space_1_space_1_space_13 = 0 M;
  real E1_space_1_space_1_space_1 = 0 M;
  real E1_space_2_space_1_space_3 = 0 M;
  real Cholesterol_space_ester(time) M;
  real space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA(time) M;
  real Choloyl_minus_CoA(time) M;
  real Cholesterol(time) M;
  real space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA(time) M;
  real space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA(time) M;
  real Chenodeoxyglycocholoyl_minus_CoA(time) M;
  real Chenodeoxycholoyl_minus_CoA(time) M;
  real R04811(time) katal;
  extern real R04811.kf;
  extern real R04811.kb;
  real R04809(time) katal;
  extern real R04809.kf;
  extern real R04809.kb;
  real R04547(time) katal;
  extern real R04547.kf;
  extern real R04547.kb;
  real R04592(time) katal;
  extern real R04592.kf;
  extern real R04592.kb;
  real R04812(time) katal;
  extern real R04812.kf;
  extern real R04812.kb;
  real R04813(time) katal;
  extern real R04813.kf;
  extern real R04813.kb;
  real R01462(time) katal;
  extern real R01462.kf;
  extern real R01462.kb;
  real R03719(time) katal;
  extern real R03719.kf;
  extern real R03719.kb;
  real R04506(time) katal;
  extern real R04506.kf;
  extern real R04506.kb;
  real R04805(time) katal;
  extern real R04805.kf;
  extern real R04805.kb;
  real R04546(time) katal;
  extern real R04546.kf;
  extern real R04546.kb;
  real R04810(time) katal;
  extern real R04810.kf;
  extern real R04810.kb;

  // equations
  when (time=time.min) Cholesterol_space_ester = 0;
  Cholesterol_space_ester:time = (R01462)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA:time = (-1*R04592)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA:time = (R04592 + -1*R04813)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA:time = (-1*R04812 + R04813)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA:time = (R04812 + -1*R03719)/uVol;
  when (time=time.min) Choloyl_minus_CoA = 0;
  Choloyl_minus_CoA:time = (R03719)/uVol;
  when (time=time.min) Cholesterol = 0;
  Cholesterol:time = (-1*R01462)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane = 0;
  space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane:time = (-1*R04805)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al:time = (-1*R04506 + R04805)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate:time = (R04506)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA:time = (-1*R04547 + -1*R04546)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA:time = (-1*R04809 + R04547)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA:time = (R04809 + -1*R04810)/uVol;
  when (time=time.min) space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA = 0;
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA:time = (-1*R04811 + R04810)/uVol;
  when (time=time.min) Chenodeoxyglycocholoyl_minus_CoA = 0;
  Chenodeoxyglycocholoyl_minus_CoA:time = (R04811)/uVol;
  when (time=time.min) Chenodeoxycholoyl_minus_CoA = 0;
  Chenodeoxycholoyl_minus_CoA:time = (R04546)/uVol;
  R04811 = R04811.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA - R04811.kb*Chenodeoxyglycocholoyl_minus_CoA;
  R04809 = R04809.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA - R04809.kb*space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA;
  R04547 = R04547.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA - R04547.kb*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA;
  R04592 = R04592.kf*space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA - R04592.kb*space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA;
  R04812 = R04812.kf*space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA - R04812.kb*space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA;
  R04813 = R04813.kf*space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA - R04813.kb*space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA;
  R01462 = R01462.kf*Cholesterol - R01462.kb*Cholesterol_space_ester;
  R03719 = R03719.kf*space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA - R03719.kb*Choloyl_minus_CoA;
  R04506 = R04506.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al - R04506.kb*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate;
  R04805 = R04805.kf*space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane - R04805.kb*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al;
  R04546 = R04546.kf*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA - R04546.kb*Chenodeoxycholoyl_minus_CoA;
  R04810 = R04810.kf*space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA - R04810.kb*space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E4_space_2_space_1_space_minus_.sbmlRole="species";
  E4_space_2_space_1_space_minus_.sbmlCompartment="uVol";
  E1_space_1_space_1_space_minus_.sbmlRole="species";
  E1_space_1_space_1_space_minus_.sbmlCompartment="uVol";
  E1_space_3_space_99_space_minus_.sbmlRole="species";
  E1_space_3_space_99_space_minus_.sbmlCompartment="uVol";
  E2_space_3_space_1_space_16.sbmlRole="species";
  E2_space_3_space_1_space_16.sbmlCompartment="uVol";
  E3_space_1_space_1_space_13.sbmlRole="species";
  E3_space_1_space_1_space_13.sbmlCompartment="uVol";
  E1_space_1_space_1_space_1.sbmlRole="species";
  E1_space_1_space_1_space_1.sbmlCompartment="uVol";
  E1_space_2_space_1_space_3.sbmlRole="species";
  E1_space_2_space_1_space_3.sbmlCompartment="uVol";
  Cholesterol_space_ester.sbmlRole="species";
  Cholesterol_space_ester.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_12_alpha_space_24_minus_Tetrahydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_12_alpha_minus_Trihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA.sbmlCompartment="uVol";
  Choloyl_minus_CoA.sbmlRole="species";
  Choloyl_minus_CoA.sbmlCompartment="uVol";
  Cholesterol.sbmlRole="species";
  Cholesterol.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_26_minus_Trihydroxy_minus_5_beta_minus_cholestane.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestan_minus_26_minus_al.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanate.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_cholest_minus_24_minus_enoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_space_24_minus_Trihydroxy_minus_5_beta_minus_cholestanoyl_minus_CoA.sbmlCompartment="uVol";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA.sbmlRole="species";
  space_3_alpha_space_7_alpha_minus_Dihydroxy_minus_5_beta_minus_24_minus_oxocholestanoyl_minus_CoA.sbmlCompartment="uVol";
  Chenodeoxyglycocholoyl_minus_CoA.sbmlRole="species";
  Chenodeoxyglycocholoyl_minus_CoA.sbmlCompartment="uVol";
  Chenodeoxycholoyl_minus_CoA.sbmlRole="species";
  Chenodeoxycholoyl_minus_CoA.sbmlCompartment="uVol";
  R04811.sbmlRole="rate";
  R04811.kf.sbmlRole="rate";
  R04811.kb.sbmlRole="rate";
  R04809.sbmlRole="rate";
  R04809.kf.sbmlRole="rate";
  R04809.kb.sbmlRole="rate";
  R04547.sbmlRole="rate";
  R04547.kf.sbmlRole="rate";
  R04547.kb.sbmlRole="rate";
  R04592.sbmlRole="rate";
  R04592.kf.sbmlRole="rate";
  R04592.kb.sbmlRole="rate";
  R04812.sbmlRole="rate";
  R04812.kf.sbmlRole="rate";
  R04812.kb.sbmlRole="rate";
  R04813.sbmlRole="rate";
  R04813.kf.sbmlRole="rate";
  R04813.kb.sbmlRole="rate";
  R01462.sbmlRole="rate";
  R01462.kf.sbmlRole="rate";
  R01462.kb.sbmlRole="rate";
  R03719.sbmlRole="rate";
  R03719.kf.sbmlRole="rate";
  R03719.kb.sbmlRole="rate";
  R04506.sbmlRole="rate";
  R04506.kf.sbmlRole="rate";
  R04506.kb.sbmlRole="rate";
  R04805.sbmlRole="rate";
  R04805.kf.sbmlRole="rate";
  R04805.kb.sbmlRole="rate";
  R04546.sbmlRole="rate";
  R04546.kf.sbmlRole="rate";
  R04546.kb.sbmlRole="rate";
  R04810.sbmlRole="rate";
  R04810.kf.sbmlRole="rate";
  R04810.kb.sbmlRole="rate";
}