// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R04475: N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate => N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate 
// R02291: L_minus_Aspartate_space_4_minus_semialdehyde <=> space_4_minus_Phospho_minus_L_minus_aspartate 
// R03658: L_minus_Lysine <=> L_minus_Lysyl_minus_tRNA 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E1_space_2_space_1_space_11 = 0 M;
  real E2_space_6_space_1_space_17 = 0 M;
  real E6_space_1_space_1_space_6 = 0 M;
  real space_4_minus_Phospho_minus_L_minus_aspartate(time) M;
  real L_minus_Aspartate_space_4_minus_semialdehyde(time) M;
  real N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate(time) M;
  real N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate(time) M;
  real L_minus_Lysine(time) M;
  real L_minus_Lysyl_minus_tRNA(time) M;
  real R04475(time) katal;
  extern real R04475.kf;
  extern real R04475.kb;
  real R02291(time) katal;
  extern real R02291.kf;
  extern real R02291.kb;
  real R03658(time) katal;
  extern real R03658.kf;
  extern real R03658.kb;

  // equations
  when (time=time.min) space_4_minus_Phospho_minus_L_minus_aspartate = 0;
  space_4_minus_Phospho_minus_L_minus_aspartate:time = (R02291)/uVol;
  when (time=time.min) L_minus_Aspartate_space_4_minus_semialdehyde = 0;
  L_minus_Aspartate_space_4_minus_semialdehyde:time = (-1*R02291)/uVol;
  when (time=time.min) N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate = 0;
  N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate:time = (R04475)/uVol;
  when (time=time.min) N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate = 0;
  N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate:time = (-1*R04475)/uVol;
  when (time=time.min) L_minus_Lysine = 0;
  L_minus_Lysine:time = (-1*R03658)/uVol;
  when (time=time.min) L_minus_Lysyl_minus_tRNA = 0;
  L_minus_Lysyl_minus_tRNA:time = (R03658)/uVol;
  R04475 = R04475.kf*N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate - R04475.kb*N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate;
  R02291 = R02291.kf*L_minus_Aspartate_space_4_minus_semialdehyde - R02291.kb*space_4_minus_Phospho_minus_L_minus_aspartate;
  R03658 = R03658.kf*L_minus_Lysine - R03658.kb*L_minus_Lysyl_minus_tRNA;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E1_space_2_space_1_space_11.sbmlRole="species";
  E1_space_2_space_1_space_11.sbmlCompartment="uVol";
  E2_space_6_space_1_space_17.sbmlRole="species";
  E2_space_6_space_1_space_17.sbmlCompartment="uVol";
  E6_space_1_space_1_space_6.sbmlRole="species";
  E6_space_1_space_1_space_6.sbmlCompartment="uVol";
  space_4_minus_Phospho_minus_L_minus_aspartate.sbmlRole="species";
  space_4_minus_Phospho_minus_L_minus_aspartate.sbmlCompartment="uVol";
  L_minus_Aspartate_space_4_minus_semialdehyde.sbmlRole="species";
  L_minus_Aspartate_space_4_minus_semialdehyde.sbmlCompartment="uVol";
  N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate.sbmlRole="species";
  N_minus_Succinyl_minus_2_minus_L_minus_amino_minus_6_minus_oxoheptanedioate.sbmlCompartment="uVol";
  N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate.sbmlRole="species";
  N_minus_Succinyl_minus_LL_minus_2_space_6_minus_diaminoheptanedioate.sbmlCompartment="uVol";
  L_minus_Lysine.sbmlRole="species";
  L_minus_Lysine.sbmlCompartment="uVol";
  L_minus_Lysyl_minus_tRNA.sbmlRole="species";
  L_minus_Lysyl_minus_tRNA.sbmlCompartment="uVol";
  R04475.sbmlRole="rate";
  R04475.kf.sbmlRole="rate";
  R04475.kb.sbmlRole="rate";
  R02291.sbmlRole="rate";
  R02291.kf.sbmlRole="rate";
  R02291.kb.sbmlRole="rate";
  R03658.sbmlRole="rate";
  R03658.kf.sbmlRole="rate";
  R03658.kb.sbmlRole="rate";
}