// This model generated automatically from SBML // unit definitions import nsrunit; unit conversion off; // SBML property definitions property sbmlRole=string; property sbmlName=string; property sbmlCompartment=string; // SBML reactions // R00959: D_minus_Glucose_space_1_minus_phosphate => alpha_minus_D_minus_Glucose_space_6_minus_phosphate // R03635: Stachyose <=> D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose D_minus_Fructose // R00289: D_minus_Glucose_space_1_minus_phosphate => UDP_minus_glucose // R02410: Raffinose <=> Melibiose D_minus_Fructose // R03236: D_minus_Tagatose_space_6_minus_phosphate => D_minus_Tagatose_space_1_space_6_minus_bisphosphate // R01786: alpha_minus_D_minus_Glucose => alpha_minus_D_minus_Glucose_space_6_minus_phosphate // R00291: UDP_minus_glucose => UDP_minus_D_minus_galactose math main { realDomain time second; time.min=0; extern time.max; extern time.delta; // variable definitions real default = 1 L; real uVol = 1 L; real E2_space_7_space_1_space_11 = 0 M; real E2_space_7_space_1_space_2 = 0 M; real E2_space_7_space_7_space_9 = 0 M; real E5_space_4_space_2_space_2 = 0 M; real E5_space_1_space_3_space_2 = 0 M; real E3_space_2_space_1_space_26 = 0 M; real D_minus_Tagatose_space_1_space_6_minus_bisphosphate(time) M; real D_minus_Tagatose_space_6_minus_phosphate(time) M; real UDP_minus_D_minus_galactose(time) M; real alpha_minus_D_minus_Glucose(time) M; real UDP_minus_glucose(time) M; real D_minus_Glucose_space_1_minus_phosphate(time) M; real alpha_minus_D_minus_Glucose_space_6_minus_phosphate(time) M; real Raffinose(time) M; real Stachyose(time) M; real D_minus_Fructose(time) M; real Melibiose(time) M; real D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose(time) M; real R00959(time) katal; extern real R00959.kf; extern real R00959.kb; real R03635(time) katal; extern real R03635.kf; extern real R03635.kb; real R00289(time) katal; extern real R00289.kf; extern real R00289.kb; real R02410(time) katal; extern real R02410.kf; extern real R02410.kb; real R03236(time) katal; extern real R03236.kf; extern real R03236.kb; real R01786(time) katal; extern real R01786.kf; extern real R01786.kb; real R00291(time) katal; extern real R00291.kf; extern real R00291.kb; // equations when (time=time.min) D_minus_Tagatose_space_1_space_6_minus_bisphosphate = 0; D_minus_Tagatose_space_1_space_6_minus_bisphosphate:time = (R03236)/uVol; when (time=time.min) D_minus_Tagatose_space_6_minus_phosphate = 0; D_minus_Tagatose_space_6_minus_phosphate:time = (-1*R03236)/uVol; when (time=time.min) UDP_minus_D_minus_galactose = 0; UDP_minus_D_minus_galactose:time = (R00291)/uVol; when (time=time.min) alpha_minus_D_minus_Glucose = 0; alpha_minus_D_minus_Glucose:time = (-1*R01786)/uVol; when (time=time.min) UDP_minus_glucose = 0; UDP_minus_glucose:time = (R00289 + -1*R00291)/uVol; when (time=time.min) D_minus_Glucose_space_1_minus_phosphate = 0; D_minus_Glucose_space_1_minus_phosphate:time = (-1*R00959 + -1*R00289)/uVol; when (time=time.min) alpha_minus_D_minus_Glucose_space_6_minus_phosphate = 0; alpha_minus_D_minus_Glucose_space_6_minus_phosphate:time = (R00959 + R01786)/uVol; when (time=time.min) Raffinose = 0; Raffinose:time = (-1*R02410)/uVol; when (time=time.min) Stachyose = 0; Stachyose:time = (-1*R03635)/uVol; when (time=time.min) D_minus_Fructose = 0; D_minus_Fructose:time = (R03635 + R02410)/uVol; when (time=time.min) Melibiose = 0; Melibiose:time = (R02410)/uVol; when (time=time.min) D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose = 0; D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose:time = (R03635)/uVol; R00959 = R00959.kf*D_minus_Glucose_space_1_minus_phosphate - R00959.kb*alpha_minus_D_minus_Glucose_space_6_minus_phosphate; R03635 = R03635.kf*Stachyose - R03635.kb*D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose*D_minus_Fructose; R00289 = R00289.kf*D_minus_Glucose_space_1_minus_phosphate - R00289.kb*UDP_minus_glucose; R02410 = R02410.kf*Raffinose - R02410.kb*Melibiose*D_minus_Fructose; R03236 = R03236.kf*D_minus_Tagatose_space_6_minus_phosphate - R03236.kb*D_minus_Tagatose_space_1_space_6_minus_bisphosphate; R01786 = R01786.kf*alpha_minus_D_minus_Glucose - R01786.kb*alpha_minus_D_minus_Glucose_space_6_minus_phosphate; R00291 = R00291.kf*UDP_minus_glucose - R00291.kb*UDP_minus_D_minus_galactose; // variable properties default.sbmlRole="compartment"; uVol.sbmlRole="compartment"; E2_space_7_space_1_space_11.sbmlRole="species"; E2_space_7_space_1_space_11.sbmlCompartment="uVol"; E2_space_7_space_1_space_2.sbmlRole="species"; E2_space_7_space_1_space_2.sbmlCompartment="uVol"; E2_space_7_space_7_space_9.sbmlRole="species"; E2_space_7_space_7_space_9.sbmlCompartment="uVol"; E5_space_4_space_2_space_2.sbmlRole="species"; E5_space_4_space_2_space_2.sbmlCompartment="uVol"; E5_space_1_space_3_space_2.sbmlRole="species"; E5_space_1_space_3_space_2.sbmlCompartment="uVol"; E3_space_2_space_1_space_26.sbmlRole="species"; E3_space_2_space_1_space_26.sbmlCompartment="uVol"; D_minus_Tagatose_space_1_space_6_minus_bisphosphate.sbmlRole="species"; D_minus_Tagatose_space_1_space_6_minus_bisphosphate.sbmlCompartment="uVol"; D_minus_Tagatose_space_6_minus_phosphate.sbmlRole="species"; D_minus_Tagatose_space_6_minus_phosphate.sbmlCompartment="uVol"; UDP_minus_D_minus_galactose.sbmlRole="species"; UDP_minus_D_minus_galactose.sbmlCompartment="uVol"; alpha_minus_D_minus_Glucose.sbmlRole="species"; alpha_minus_D_minus_Glucose.sbmlCompartment="uVol"; UDP_minus_glucose.sbmlRole="species"; UDP_minus_glucose.sbmlCompartment="uVol"; D_minus_Glucose_space_1_minus_phosphate.sbmlRole="species"; D_minus_Glucose_space_1_minus_phosphate.sbmlCompartment="uVol"; alpha_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlRole="species"; alpha_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlCompartment="uVol"; Raffinose.sbmlRole="species"; Raffinose.sbmlCompartment="uVol"; Stachyose.sbmlRole="species"; Stachyose.sbmlCompartment="uVol"; D_minus_Fructose.sbmlRole="species"; D_minus_Fructose.sbmlCompartment="uVol"; Melibiose.sbmlRole="species"; Melibiose.sbmlCompartment="uVol"; D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose.sbmlRole="species"; D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose.sbmlCompartment="uVol"; R00959.sbmlRole="rate"; R00959.kf.sbmlRole="rate"; R00959.kb.sbmlRole="rate"; R03635.sbmlRole="rate"; R03635.kf.sbmlRole="rate"; R03635.kb.sbmlRole="rate"; R00289.sbmlRole="rate"; R00289.kf.sbmlRole="rate"; R00289.kb.sbmlRole="rate"; R02410.sbmlRole="rate"; R02410.kf.sbmlRole="rate"; R02410.kb.sbmlRole="rate"; R03236.sbmlRole="rate"; R03236.kf.sbmlRole="rate"; R03236.kb.sbmlRole="rate"; R01786.sbmlRole="rate"; R01786.kf.sbmlRole="rate"; R01786.kb.sbmlRole="rate"; R00291.sbmlRole="rate"; R00291.kf.sbmlRole="rate"; R00291.kb.sbmlRole="rate"; }