// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R03706: space_Alginate_space_n <=> Oligouronides 
// R00883: D_minus_Mannose_space_1_minus_phosphate <=> GDP_minus_mannose 
// R01818: D_minus_Mannose_space_1_minus_phosphate => D_minus_Mannose_space_6_minus_phosphate 
// R01819: D_minus_Mannose_space_6_minus_phosphate => beta_minus_D_minus_Fructose_space_6_minus_phosphate 
// R00885: D_minus_Mannose_space_1_minus_phosphate <=> GDP_minus_mannose 
// R01070: beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate => space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal 
// R01015: space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal => Glycerone_space_phosphate 
// R02568: D_minus_Fructose_space_1_minus_phosphate => D_minus_Glyceraldehyde 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E4_space_2_space_2_space_3 = 0 M;
  real E5_space_3_space_1_space_1 = 0 M;
  real E4_space_1_space_2_space_13 = 0 M;
  real E2_space_7_space_7_space_13 = 0 M;
  real E5_space_4_space_2_space_8 = 0 M;
  real E2_space_7_space_7_space_22 = 0 M;
  real E5_space_3_space_1_space_8 = 0 M;
  real Oligouronides(time) M;
  real space_Alginate_space_n(time) M;
  real Glycerone_space_phosphate(time) M;
  real D_minus_Glyceraldehyde(time) M;
  real D_minus_Mannose_space_6_minus_phosphate(time) M;
  real D_minus_Mannose_space_1_minus_phosphate(time) M;
  real GDP_minus_mannose(time) M;
  real D_minus_Fructose_space_1_minus_phosphate(time) M;
  real beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate(time) M;
  real space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal(time) M;
  real beta_minus_D_minus_Fructose_space_6_minus_phosphate(time) M;
  real R03706(time) katal;
  extern real R03706.kf;
  extern real R03706.kb;
  real R00883(time) katal;
  extern real R00883.kf;
  extern real R00883.kb;
  real R01818(time) katal;
  extern real R01818.kf;
  extern real R01818.kb;
  real R01819(time) katal;
  extern real R01819.kf;
  extern real R01819.kb;
  real R00885(time) katal;
  extern real R00885.kf;
  extern real R00885.kb;
  real R01070(time) katal;
  extern real R01070.kf;
  extern real R01070.kb;
  real R01015(time) katal;
  extern real R01015.kf;
  extern real R01015.kb;
  real R02568(time) katal;
  extern real R02568.kf;
  extern real R02568.kb;

  // equations
  when (time=time.min) Oligouronides = 0;
  Oligouronides:time = (R03706)/uVol;
  when (time=time.min) space_Alginate_space_n = 0;
  space_Alginate_space_n:time = (-1*R03706)/uVol;
  when (time=time.min) Glycerone_space_phosphate = 0;
  Glycerone_space_phosphate:time = (R01015)/uVol;
  when (time=time.min) D_minus_Glyceraldehyde = 0;
  D_minus_Glyceraldehyde:time = (R02568)/uVol;
  when (time=time.min) D_minus_Mannose_space_6_minus_phosphate = 0;
  D_minus_Mannose_space_6_minus_phosphate:time = (R01818 + -1*R01819)/uVol;
  when (time=time.min) D_minus_Mannose_space_1_minus_phosphate = 0;
  D_minus_Mannose_space_1_minus_phosphate:time = (-1*R00883 + -1*R01818 + -1*R00885)/uVol;
  when (time=time.min) GDP_minus_mannose = 0;
  GDP_minus_mannose:time = (R00883 + R00885)/uVol;
  when (time=time.min) D_minus_Fructose_space_1_minus_phosphate = 0;
  D_minus_Fructose_space_1_minus_phosphate:time = (-1*R02568)/uVol;
  when (time=time.min) beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate = 0;
  beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate:time = (-1*R01070)/uVol;
  when (time=time.min) space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal = 0;
  space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal:time = (R01070 + -1*R01015)/uVol;
  when (time=time.min) beta_minus_D_minus_Fructose_space_6_minus_phosphate = 0;
  beta_minus_D_minus_Fructose_space_6_minus_phosphate:time = (R01819)/uVol;
  R03706 = R03706.kf*space_Alginate_space_n - R03706.kb*Oligouronides;
  R00883 = R00883.kf*D_minus_Mannose_space_1_minus_phosphate - R00883.kb*GDP_minus_mannose;
  R01818 = R01818.kf*D_minus_Mannose_space_1_minus_phosphate - R01818.kb*D_minus_Mannose_space_6_minus_phosphate;
  R01819 = R01819.kf*D_minus_Mannose_space_6_minus_phosphate - R01819.kb*beta_minus_D_minus_Fructose_space_6_minus_phosphate;
  R00885 = R00885.kf*D_minus_Mannose_space_1_minus_phosphate - R00885.kb*GDP_minus_mannose;
  R01070 = R01070.kf*beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate - R01070.kb*space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal;
  R01015 = R01015.kf*space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal - R01015.kb*Glycerone_space_phosphate;
  R02568 = R02568.kf*D_minus_Fructose_space_1_minus_phosphate - R02568.kb*D_minus_Glyceraldehyde;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E4_space_2_space_2_space_3.sbmlRole="species";
  E4_space_2_space_2_space_3.sbmlCompartment="uVol";
  E5_space_3_space_1_space_1.sbmlRole="species";
  E5_space_3_space_1_space_1.sbmlCompartment="uVol";
  E4_space_1_space_2_space_13.sbmlRole="species";
  E4_space_1_space_2_space_13.sbmlCompartment="uVol";
  E2_space_7_space_7_space_13.sbmlRole="species";
  E2_space_7_space_7_space_13.sbmlCompartment="uVol";
  E5_space_4_space_2_space_8.sbmlRole="species";
  E5_space_4_space_2_space_8.sbmlCompartment="uVol";
  E2_space_7_space_7_space_22.sbmlRole="species";
  E2_space_7_space_7_space_22.sbmlCompartment="uVol";
  E5_space_3_space_1_space_8.sbmlRole="species";
  E5_space_3_space_1_space_8.sbmlCompartment="uVol";
  Oligouronides.sbmlRole="species";
  Oligouronides.sbmlCompartment="uVol";
  space_Alginate_space_n.sbmlRole="species";
  space_Alginate_space_n.sbmlCompartment="uVol";
  Glycerone_space_phosphate.sbmlRole="species";
  Glycerone_space_phosphate.sbmlCompartment="uVol";
  D_minus_Glyceraldehyde.sbmlRole="species";
  D_minus_Glyceraldehyde.sbmlCompartment="uVol";
  D_minus_Mannose_space_6_minus_phosphate.sbmlRole="species";
  D_minus_Mannose_space_6_minus_phosphate.sbmlCompartment="uVol";
  D_minus_Mannose_space_1_minus_phosphate.sbmlRole="species";
  D_minus_Mannose_space_1_minus_phosphate.sbmlCompartment="uVol";
  GDP_minus_mannose.sbmlRole="species";
  GDP_minus_mannose.sbmlCompartment="uVol";
  D_minus_Fructose_space_1_minus_phosphate.sbmlRole="species";
  D_minus_Fructose_space_1_minus_phosphate.sbmlCompartment="uVol";
  beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlRole="species";
  beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlCompartment="uVol";
  space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal.sbmlRole="species";
  space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal.sbmlCompartment="uVol";
  beta_minus_D_minus_Fructose_space_6_minus_phosphate.sbmlRole="species";
  beta_minus_D_minus_Fructose_space_6_minus_phosphate.sbmlCompartment="uVol";
  R03706.sbmlRole="rate";
  R03706.kf.sbmlRole="rate";
  R03706.kb.sbmlRole="rate";
  R00883.sbmlRole="rate";
  R00883.kf.sbmlRole="rate";
  R00883.kb.sbmlRole="rate";
  R01818.sbmlRole="rate";
  R01818.kf.sbmlRole="rate";
  R01818.kb.sbmlRole="rate";
  R01819.sbmlRole="rate";
  R01819.kf.sbmlRole="rate";
  R01819.kb.sbmlRole="rate";
  R00885.sbmlRole="rate";
  R00885.kf.sbmlRole="rate";
  R00885.kb.sbmlRole="rate";
  R01070.sbmlRole="rate";
  R01070.kf.sbmlRole="rate";
  R01070.kb.sbmlRole="rate";
  R01015.sbmlRole="rate";
  R01015.kf.sbmlRole="rate";
  R01015.kb.sbmlRole="rate";
  R02568.sbmlRole="rate";
  R02568.kf.sbmlRole="rate";
  R02568.kb.sbmlRole="rate";
}