// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R04779: beta_minus_D_minus_Fructose_space_6_minus_phosphate <=> beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate 
// R00014: Pyruvate Thiamin_space_diphosphate <=> space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate 
// R03321: beta_minus_D_minus_Glucose_space_6_minus_phosphate => beta_minus_D_minus_Fructose_space_6_minus_phosphate 
// R01015: space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal => Glycerone_space_phosphate 
// R01518: space_2_minus_Phospho_minus_D_minus_glycerate => space_3_minus_Phospho_minus_D_minus_glycerate 
// R01070: beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate => space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal Glycerone_space_phosphate 
// R02739: alpha_minus_D_minus_Glucose_space_6_minus_phosphate => beta_minus_D_minus_Glucose_space_6_minus_phosphate 
// R02569: Acetyl_minus_CoA Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine => space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_ 
// R02740: alpha_minus_D_minus_Glucose_space_6_minus_phosphate => beta_minus_D_minus_Fructose_space_6_minus_phosphate 
// R07618: Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine => Enzyme_space_N6_minus_space_lipoyl_space_lysine 
// R01512: space_3_minus_Phospho_minus_D_minus_glycerate => space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate 
// R00200: Pyruvate <=> Phosphoenolpyruvate 
// R03270: space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate Enzyme_space_N6_minus_space_lipoyl_space_lysine <=> space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_ Thiamin_space_diphosphate 
// R00658: space_2_minus_Phospho_minus_D_minus_glycerate => Phosphoenolpyruvate 
// R01061: space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal => space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E2_space_3_space_1_space_12 = 0 M;
  real E1_space_8_space_1_space_4 = 0 M;
  real E5_space_3_space_1_space_1 = 0 M;
  real E5_space_3_space_1_space_9 = 0 M;
  real E1_space_2_space_4_space_1 = 0 M;
  real E4_space_1_space_2_space_13 = 0 M;
  real E2_space_7_space_2_space_3 = 0 M;
  real E5_space_4_space_2_space_1 = 0 M;
  real E4_space_2_space_1_space_11 = 0 M;
  real E2_space_7_space_1_space_40 = 0 M;
  real E1_space_2_space_1_space_12 = 0 M;
  real E2_space_7_space_1_space_11 = 0 M;
  real Acetyl_minus_CoA(time) M;
  real Glycerone_space_phosphate(time) M;
  real Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine(time) M;
  real beta_minus_D_minus_Glucose_space_6_minus_phosphate(time) M;
  real space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_(time) M;
  real Enzyme_space_N6_minus_space_lipoyl_space_lysine(time) M;
  real Thiamin_space_diphosphate(time) M;
  real space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate(time) M;
  real alpha_minus_D_minus_Glucose_space_6_minus_phosphate(time) M;
  real beta_minus_D_minus_Fructose_space_6_minus_phosphate(time) M;
  real beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate(time) M;
  real space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal(time) M;
  real space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate(time) M;
  real space_3_minus_Phospho_minus_D_minus_glycerate(time) M;
  real space_2_minus_Phospho_minus_D_minus_glycerate(time) M;
  real Phosphoenolpyruvate(time) M;
  real Pyruvate(time) M;
  real R04779(time) katal;
  extern real R04779.kf;
  extern real R04779.kb;
  real R00014(time) katal;
  extern real R00014.kf;
  extern real R00014.kb;
  real R03321(time) katal;
  extern real R03321.kf;
  extern real R03321.kb;
  real R01015(time) katal;
  extern real R01015.kf;
  extern real R01015.kb;
  real R01518(time) katal;
  extern real R01518.kf;
  extern real R01518.kb;
  real R01070(time) katal;
  extern real R01070.kf;
  extern real R01070.kb;
  real R02739(time) katal;
  extern real R02739.kf;
  extern real R02739.kb;
  real R02569(time) katal;
  extern real R02569.kf;
  extern real R02569.kb;
  real R02740(time) katal;
  extern real R02740.kf;
  extern real R02740.kb;
  real R07618(time) katal;
  extern real R07618.kf;
  extern real R07618.kb;
  real R01512(time) katal;
  extern real R01512.kf;
  extern real R01512.kb;
  real R00200(time) katal;
  extern real R00200.kf;
  extern real R00200.kb;
  real R03270(time) katal;
  extern real R03270.kf;
  extern real R03270.kb;
  real R00658(time) katal;
  extern real R00658.kf;
  extern real R00658.kb;
  real R01061(time) katal;
  extern real R01061.kf;
  extern real R01061.kb;

  // equations
  when (time=time.min) Acetyl_minus_CoA = 0;
  Acetyl_minus_CoA:time = (-1*R02569)/uVol;
  when (time=time.min) Glycerone_space_phosphate = 0;
  Glycerone_space_phosphate:time = (R01015 + R01070)/uVol;
  when (time=time.min) Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine = 0;
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine:time = (-1*R02569 + -1*R07618)/uVol;
  when (time=time.min) beta_minus_D_minus_Glucose_space_6_minus_phosphate = 0;
  beta_minus_D_minus_Glucose_space_6_minus_phosphate:time = (-1*R03321 + R02739)/uVol;
  when (time=time.min) space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_ = 0;
  space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_:time = (R02569 + R03270)/uVol;
  when (time=time.min) Enzyme_space_N6_minus_space_lipoyl_space_lysine = 0;
  Enzyme_space_N6_minus_space_lipoyl_space_lysine:time = (R07618 + -1*R03270)/uVol;
  when (time=time.min) Thiamin_space_diphosphate = 0;
  Thiamin_space_diphosphate:time = (-1*R00014 + R03270)/uVol;
  when (time=time.min) space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate = 0;
  space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate:time = (R00014 + -1*R03270)/uVol;
  when (time=time.min) alpha_minus_D_minus_Glucose_space_6_minus_phosphate = 0;
  alpha_minus_D_minus_Glucose_space_6_minus_phosphate:time = (-1*R02739 + -1*R02740)/uVol;
  when (time=time.min) beta_minus_D_minus_Fructose_space_6_minus_phosphate = 0;
  beta_minus_D_minus_Fructose_space_6_minus_phosphate:time = (-1*R04779 + R03321 + R02740)/uVol;
  when (time=time.min) beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate = 0;
  beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate:time = (R04779 + -1*R01070)/uVol;
  when (time=time.min) space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal = 0;
  space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal:time = (-1*R01015 + R01070 + -1*R01061)/uVol;
  when (time=time.min) space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate = 0;
  space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate:time = (R01512 + R01061)/uVol;
  when (time=time.min) space_3_minus_Phospho_minus_D_minus_glycerate = 0;
  space_3_minus_Phospho_minus_D_minus_glycerate:time = (R01518 + -1*R01512)/uVol;
  when (time=time.min) space_2_minus_Phospho_minus_D_minus_glycerate = 0;
  space_2_minus_Phospho_minus_D_minus_glycerate:time = (-1*R01518 + -1*R00658)/uVol;
  when (time=time.min) Phosphoenolpyruvate = 0;
  Phosphoenolpyruvate:time = (R00200 + R00658)/uVol;
  when (time=time.min) Pyruvate = 0;
  Pyruvate:time = (-1*R00014 + -1*R00200)/uVol;
  R04779 = R04779.kf*beta_minus_D_minus_Fructose_space_6_minus_phosphate - R04779.kb*beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate;
  R00014 = R00014.kf*Pyruvate*Thiamin_space_diphosphate - R00014.kb*space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate;
  R03321 = R03321.kf*beta_minus_D_minus_Glucose_space_6_minus_phosphate - R03321.kb*beta_minus_D_minus_Fructose_space_6_minus_phosphate;
  R01015 = R01015.kf*space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal - R01015.kb*Glycerone_space_phosphate;
  R01518 = R01518.kf*space_2_minus_Phospho_minus_D_minus_glycerate - R01518.kb*space_3_minus_Phospho_minus_D_minus_glycerate;
  R01070 = R01070.kf*beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate - R01070.kb*space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal*Glycerone_space_phosphate;
  R02739 = R02739.kf*alpha_minus_D_minus_Glucose_space_6_minus_phosphate - R02739.kb*beta_minus_D_minus_Glucose_space_6_minus_phosphate;
  R02569 = R02569.kf*Acetyl_minus_CoA*Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine - R02569.kb*space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_;
  R02740 = R02740.kf*alpha_minus_D_minus_Glucose_space_6_minus_phosphate - R02740.kb*beta_minus_D_minus_Fructose_space_6_minus_phosphate;
  R07618 = R07618.kf*Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine - R07618.kb*Enzyme_space_N6_minus_space_lipoyl_space_lysine;
  R01512 = R01512.kf*space_3_minus_Phospho_minus_D_minus_glycerate - R01512.kb*space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate;
  R00200 = R00200.kf*Pyruvate - R00200.kb*Phosphoenolpyruvate;
  R03270 = R03270.kf*space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate*Enzyme_space_N6_minus_space_lipoyl_space_lysine - R03270.kb*space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_*Thiamin_space_diphosphate;
  R00658 = R00658.kf*space_2_minus_Phospho_minus_D_minus_glycerate - R00658.kb*Phosphoenolpyruvate;
  R01061 = R01061.kf*space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal - R01061.kb*space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E2_space_3_space_1_space_12.sbmlRole="species";
  E2_space_3_space_1_space_12.sbmlCompartment="uVol";
  E1_space_8_space_1_space_4.sbmlRole="species";
  E1_space_8_space_1_space_4.sbmlCompartment="uVol";
  E5_space_3_space_1_space_1.sbmlRole="species";
  E5_space_3_space_1_space_1.sbmlCompartment="uVol";
  E5_space_3_space_1_space_9.sbmlRole="species";
  E5_space_3_space_1_space_9.sbmlCompartment="uVol";
  E1_space_2_space_4_space_1.sbmlRole="species";
  E1_space_2_space_4_space_1.sbmlCompartment="uVol";
  E4_space_1_space_2_space_13.sbmlRole="species";
  E4_space_1_space_2_space_13.sbmlCompartment="uVol";
  E2_space_7_space_2_space_3.sbmlRole="species";
  E2_space_7_space_2_space_3.sbmlCompartment="uVol";
  E5_space_4_space_2_space_1.sbmlRole="species";
  E5_space_4_space_2_space_1.sbmlCompartment="uVol";
  E4_space_2_space_1_space_11.sbmlRole="species";
  E4_space_2_space_1_space_11.sbmlCompartment="uVol";
  E2_space_7_space_1_space_40.sbmlRole="species";
  E2_space_7_space_1_space_40.sbmlCompartment="uVol";
  E1_space_2_space_1_space_12.sbmlRole="species";
  E1_space_2_space_1_space_12.sbmlCompartment="uVol";
  E2_space_7_space_1_space_11.sbmlRole="species";
  E2_space_7_space_1_space_11.sbmlCompartment="uVol";
  Acetyl_minus_CoA.sbmlRole="species";
  Acetyl_minus_CoA.sbmlCompartment="uVol";
  Glycerone_space_phosphate.sbmlRole="species";
  Glycerone_space_phosphate.sbmlCompartment="uVol";
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine.sbmlRole="species";
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine.sbmlCompartment="uVol";
  beta_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlRole="species";
  beta_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlCompartment="uVol";
  space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_.sbmlRole="species";
  space_Dihydrolipoyllysine_minus_residue_space_acetyltransferase_space_.sbmlCompartment="uVol";
  Enzyme_space_N6_minus_space_lipoyl_space_lysine.sbmlRole="species";
  Enzyme_space_N6_minus_space_lipoyl_space_lysine.sbmlCompartment="uVol";
  Thiamin_space_diphosphate.sbmlRole="species";
  Thiamin_space_diphosphate.sbmlCompartment="uVol";
  space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate.sbmlRole="species";
  space_2_minus_space_alpha_minus_Hydroxyethyl_space_thiamine_space_diphosphate.sbmlCompartment="uVol";
  alpha_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlRole="species";
  alpha_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlCompartment="uVol";
  beta_minus_D_minus_Fructose_space_6_minus_phosphate.sbmlRole="species";
  beta_minus_D_minus_Fructose_space_6_minus_phosphate.sbmlCompartment="uVol";
  beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlRole="species";
  beta_minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlCompartment="uVol";
  space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal.sbmlRole="species";
  space_2R_space_minus_2_minus_Hydroxy_minus_3_minus_space_phosphonooxy_space_minus_propanal.sbmlCompartment="uVol";
  space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate.sbmlRole="species";
  space_3_minus_Phospho_minus_D_minus_glyceroyl_space_phosphate.sbmlCompartment="uVol";
  space_3_minus_Phospho_minus_D_minus_glycerate.sbmlRole="species";
  space_3_minus_Phospho_minus_D_minus_glycerate.sbmlCompartment="uVol";
  space_2_minus_Phospho_minus_D_minus_glycerate.sbmlRole="species";
  space_2_minus_Phospho_minus_D_minus_glycerate.sbmlCompartment="uVol";
  Phosphoenolpyruvate.sbmlRole="species";
  Phosphoenolpyruvate.sbmlCompartment="uVol";
  Pyruvate.sbmlRole="species";
  Pyruvate.sbmlCompartment="uVol";
  R04779.sbmlRole="rate";
  R04779.kf.sbmlRole="rate";
  R04779.kb.sbmlRole="rate";
  R00014.sbmlRole="rate";
  R00014.kf.sbmlRole="rate";
  R00014.kb.sbmlRole="rate";
  R03321.sbmlRole="rate";
  R03321.kf.sbmlRole="rate";
  R03321.kb.sbmlRole="rate";
  R01015.sbmlRole="rate";
  R01015.kf.sbmlRole="rate";
  R01015.kb.sbmlRole="rate";
  R01518.sbmlRole="rate";
  R01518.kf.sbmlRole="rate";
  R01518.kb.sbmlRole="rate";
  R01070.sbmlRole="rate";
  R01070.kf.sbmlRole="rate";
  R01070.kb.sbmlRole="rate";
  R02739.sbmlRole="rate";
  R02739.kf.sbmlRole="rate";
  R02739.kb.sbmlRole="rate";
  R02569.sbmlRole="rate";
  R02569.kf.sbmlRole="rate";
  R02569.kb.sbmlRole="rate";
  R02740.sbmlRole="rate";
  R02740.kf.sbmlRole="rate";
  R02740.kb.sbmlRole="rate";
  R07618.sbmlRole="rate";
  R07618.kf.sbmlRole="rate";
  R07618.kb.sbmlRole="rate";
  R01512.sbmlRole="rate";
  R01512.kf.sbmlRole="rate";
  R01512.kb.sbmlRole="rate";
  R00200.sbmlRole="rate";
  R00200.kf.sbmlRole="rate";
  R00200.kb.sbmlRole="rate";
  R03270.sbmlRole="rate";
  R03270.kf.sbmlRole="rate";
  R03270.kb.sbmlRole="rate";
  R00658.sbmlRole="rate";
  R00658.kf.sbmlRole="rate";
  R00658.kb.sbmlRole="rate";
  R01061.sbmlRole="rate";
  R01061.kf.sbmlRole="rate";
  R01061.kb.sbmlRole="rate";
}