// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R00405: Succinate => Succinyl_minus_CoA 
// R00341: Oxaloacetate => Phosphoenolpyruvate 
// R01082: space_S_space_minus_Malate => Fumarate 
// R07618: Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine => Enzyme_space_N6_minus_space_lipoyl_space_lysine 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E4_space_2_space_1_space_2 = 0 M;
  real E6_space_2_space_1_space_5 = 0 M;
  real E4_space_1_space_1_space_49 = 0 M;
  real E1_space_8_space_1_space_4 = 0 M;
  real Succinate(time) M;
  real space_S_space_minus_Malate(time) M;
  real Fumarate(time) M;
  real Oxaloacetate(time) M;
  real Succinyl_minus_CoA(time) M;
  real Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine(time) M;
  real Phosphoenolpyruvate(time) M;
  real Enzyme_space_N6_minus_space_lipoyl_space_lysine(time) M;
  real R00405(time) katal;
  extern real R00405.kf;
  extern real R00405.kb;
  real R00341(time) katal;
  extern real R00341.kf;
  extern real R00341.kb;
  real R01082(time) katal;
  extern real R01082.kf;
  extern real R01082.kb;
  real R07618(time) katal;
  extern real R07618.kf;
  extern real R07618.kb;

  // equations
  when (time=time.min) Succinate = 0;
  Succinate:time = (-1*R00405)/uVol;
  when (time=time.min) space_S_space_minus_Malate = 0;
  space_S_space_minus_Malate:time = (-1*R01082)/uVol;
  when (time=time.min) Fumarate = 0;
  Fumarate:time = (R01082)/uVol;
  when (time=time.min) Oxaloacetate = 0;
  Oxaloacetate:time = (-1*R00341)/uVol;
  when (time=time.min) Succinyl_minus_CoA = 0;
  Succinyl_minus_CoA:time = (R00405)/uVol;
  when (time=time.min) Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine = 0;
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine:time = (-1*R07618)/uVol;
  when (time=time.min) Phosphoenolpyruvate = 0;
  Phosphoenolpyruvate:time = (R00341)/uVol;
  when (time=time.min) Enzyme_space_N6_minus_space_lipoyl_space_lysine = 0;
  Enzyme_space_N6_minus_space_lipoyl_space_lysine:time = (R07618)/uVol;
  R00405 = R00405.kf*Succinate - R00405.kb*Succinyl_minus_CoA;
  R00341 = R00341.kf*Oxaloacetate - R00341.kb*Phosphoenolpyruvate;
  R01082 = R01082.kf*space_S_space_minus_Malate - R01082.kb*Fumarate;
  R07618 = R07618.kf*Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine - R07618.kb*Enzyme_space_N6_minus_space_lipoyl_space_lysine;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E4_space_2_space_1_space_2.sbmlRole="species";
  E4_space_2_space_1_space_2.sbmlCompartment="uVol";
  E6_space_2_space_1_space_5.sbmlRole="species";
  E6_space_2_space_1_space_5.sbmlCompartment="uVol";
  E4_space_1_space_1_space_49.sbmlRole="species";
  E4_space_1_space_1_space_49.sbmlCompartment="uVol";
  E1_space_8_space_1_space_4.sbmlRole="species";
  E1_space_8_space_1_space_4.sbmlCompartment="uVol";
  Succinate.sbmlRole="species";
  Succinate.sbmlCompartment="uVol";
  space_S_space_minus_Malate.sbmlRole="species";
  space_S_space_minus_Malate.sbmlCompartment="uVol";
  Fumarate.sbmlRole="species";
  Fumarate.sbmlCompartment="uVol";
  Oxaloacetate.sbmlRole="species";
  Oxaloacetate.sbmlCompartment="uVol";
  Succinyl_minus_CoA.sbmlRole="species";
  Succinyl_minus_CoA.sbmlCompartment="uVol";
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine.sbmlRole="species";
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine.sbmlCompartment="uVol";
  Phosphoenolpyruvate.sbmlRole="species";
  Phosphoenolpyruvate.sbmlCompartment="uVol";
  Enzyme_space_N6_minus_space_lipoyl_space_lysine.sbmlRole="species";
  Enzyme_space_N6_minus_space_lipoyl_space_lysine.sbmlCompartment="uVol";
  R00405.sbmlRole="rate";
  R00405.kf.sbmlRole="rate";
  R00405.kb.sbmlRole="rate";
  R00341.sbmlRole="rate";
  R00341.kf.sbmlRole="rate";
  R00341.kb.sbmlRole="rate";
  R01082.sbmlRole="rate";
  R01082.kf.sbmlRole="rate";
  R01082.kb.sbmlRole="rate";
  R07618.sbmlRole="rate";
  R07618.kf.sbmlRole="rate";
  R07618.kb.sbmlRole="rate";
}