// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R00401: L_minus_Alanine => D_minus_Alanine 
// R05577: L_minus_Aspartate <=> L_minus_Aspartyl_minus_tRNA_space_Asp_space_ 
// R04212: L_minus_Aspartyl_minus_tRNA_space_Asn_space_ <=> L_minus_Asparaginyl_minus_tRNA_space_Asn_space_ 
// R03038: L_minus_Alanine => L_minus_Alanyl_minus_tRNA 
// R03648: L_minus_Asparagine <=> L_minus_Asparaginyl_minus_tRNA_space_Asn_space_ 
// R01166: Carnosine <=> beta_minus_Alanine 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E3_space_4_space_13_space_3 = 0 M;
  real E6_space_1_space_1_space_12 = 0 M;
  real E6_space_1_space_1_space_22 = 0 M;
  real E5_space_1_space_1_space_1 = 0 M;
  real E6_space_1_space_1_space_7 = 0 M;
  real E6_space_3_space_5_space_7 = 0 M;
  real beta_minus_Alanine(time) M;
  real L_minus_Aspartyl_minus_tRNA_space_Asp_space_(time) M;
  real Carnosine(time) M;
  real L_minus_Alanine(time) M;
  real L_minus_Aspartate(time) M;
  real L_minus_Asparagine(time) M;
  real L_minus_Asparaginyl_minus_tRNA_space_Asn_space_(time) M;
  real L_minus_Aspartyl_minus_tRNA_space_Asn_space_(time) M;
  real L_minus_Alanyl_minus_tRNA(time) M;
  real D_minus_Alanine(time) M;
  real R00401(time) katal;
  extern real R00401.kf;
  extern real R00401.kb;
  real R05577(time) katal;
  extern real R05577.kf;
  extern real R05577.kb;
  real R04212(time) katal;
  extern real R04212.kf;
  extern real R04212.kb;
  real R03038(time) katal;
  extern real R03038.kf;
  extern real R03038.kb;
  real R03648(time) katal;
  extern real R03648.kf;
  extern real R03648.kb;
  real R01166(time) katal;
  extern real R01166.kf;
  extern real R01166.kb;

  // equations
  when (time=time.min) beta_minus_Alanine = 0;
  beta_minus_Alanine:time = (R01166)/uVol;
  when (time=time.min) L_minus_Aspartyl_minus_tRNA_space_Asp_space_ = 0;
  L_minus_Aspartyl_minus_tRNA_space_Asp_space_:time = (R05577)/uVol;
  when (time=time.min) Carnosine = 0;
  Carnosine:time = (-1*R01166)/uVol;
  when (time=time.min) L_minus_Alanine = 0;
  L_minus_Alanine:time = (-1*R00401 + -1*R03038)/uVol;
  when (time=time.min) L_minus_Aspartate = 0;
  L_minus_Aspartate:time = (-1*R05577)/uVol;
  when (time=time.min) L_minus_Asparagine = 0;
  L_minus_Asparagine:time = (-1*R03648)/uVol;
  when (time=time.min) L_minus_Asparaginyl_minus_tRNA_space_Asn_space_ = 0;
  L_minus_Asparaginyl_minus_tRNA_space_Asn_space_:time = (R04212 + R03648)/uVol;
  when (time=time.min) L_minus_Aspartyl_minus_tRNA_space_Asn_space_ = 0;
  L_minus_Aspartyl_minus_tRNA_space_Asn_space_:time = (-1*R04212)/uVol;
  when (time=time.min) L_minus_Alanyl_minus_tRNA = 0;
  L_minus_Alanyl_minus_tRNA:time = (R03038)/uVol;
  when (time=time.min) D_minus_Alanine = 0;
  D_minus_Alanine:time = (R00401)/uVol;
  R00401 = R00401.kf*L_minus_Alanine - R00401.kb*D_minus_Alanine;
  R05577 = R05577.kf*L_minus_Aspartate - R05577.kb*L_minus_Aspartyl_minus_tRNA_space_Asp_space_;
  R04212 = R04212.kf*L_minus_Aspartyl_minus_tRNA_space_Asn_space_ - R04212.kb*L_minus_Asparaginyl_minus_tRNA_space_Asn_space_;
  R03038 = R03038.kf*L_minus_Alanine - R03038.kb*L_minus_Alanyl_minus_tRNA;
  R03648 = R03648.kf*L_minus_Asparagine - R03648.kb*L_minus_Asparaginyl_minus_tRNA_space_Asn_space_;
  R01166 = R01166.kf*Carnosine - R01166.kb*beta_minus_Alanine;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E3_space_4_space_13_space_3.sbmlRole="species";
  E3_space_4_space_13_space_3.sbmlCompartment="uVol";
  E6_space_1_space_1_space_12.sbmlRole="species";
  E6_space_1_space_1_space_12.sbmlCompartment="uVol";
  E6_space_1_space_1_space_22.sbmlRole="species";
  E6_space_1_space_1_space_22.sbmlCompartment="uVol";
  E5_space_1_space_1_space_1.sbmlRole="species";
  E5_space_1_space_1_space_1.sbmlCompartment="uVol";
  E6_space_1_space_1_space_7.sbmlRole="species";
  E6_space_1_space_1_space_7.sbmlCompartment="uVol";
  E6_space_3_space_5_space_7.sbmlRole="species";
  E6_space_3_space_5_space_7.sbmlCompartment="uVol";
  beta_minus_Alanine.sbmlRole="species";
  beta_minus_Alanine.sbmlCompartment="uVol";
  L_minus_Aspartyl_minus_tRNA_space_Asp_space_.sbmlRole="species";
  L_minus_Aspartyl_minus_tRNA_space_Asp_space_.sbmlCompartment="uVol";
  Carnosine.sbmlRole="species";
  Carnosine.sbmlCompartment="uVol";
  L_minus_Alanine.sbmlRole="species";
  L_minus_Alanine.sbmlCompartment="uVol";
  L_minus_Aspartate.sbmlRole="species";
  L_minus_Aspartate.sbmlCompartment="uVol";
  L_minus_Asparagine.sbmlRole="species";
  L_minus_Asparagine.sbmlCompartment="uVol";
  L_minus_Asparaginyl_minus_tRNA_space_Asn_space_.sbmlRole="species";
  L_minus_Asparaginyl_minus_tRNA_space_Asn_space_.sbmlCompartment="uVol";
  L_minus_Aspartyl_minus_tRNA_space_Asn_space_.sbmlRole="species";
  L_minus_Aspartyl_minus_tRNA_space_Asn_space_.sbmlCompartment="uVol";
  L_minus_Alanyl_minus_tRNA.sbmlRole="species";
  L_minus_Alanyl_minus_tRNA.sbmlCompartment="uVol";
  D_minus_Alanine.sbmlRole="species";
  D_minus_Alanine.sbmlCompartment="uVol";
  R00401.sbmlRole="rate";
  R00401.kf.sbmlRole="rate";
  R00401.kb.sbmlRole="rate";
  R05577.sbmlRole="rate";
  R05577.kf.sbmlRole="rate";
  R05577.kb.sbmlRole="rate";
  R04212.sbmlRole="rate";
  R04212.kf.sbmlRole="rate";
  R04212.kb.sbmlRole="rate";
  R03038.sbmlRole="rate";
  R03038.kf.sbmlRole="rate";
  R03038.kb.sbmlRole="rate";
  R03648.sbmlRole="rate";
  R03648.kf.sbmlRole="rate";
  R03648.kb.sbmlRole="rate";
  R01166.sbmlRole="rate";
  R01166.kf.sbmlRole="rate";
  R01166.kb.sbmlRole="rate";
}