// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R00945: space_5_space_10_minus_Methylenetetrahydrofolate Glycine => L_minus_Serine 
// R03654: Glycine <=> Glycyl_minus_tRNA_space_Gly_space_ 
// R03662: L_minus_Serine <=> L_minus_Seryl_minus_tRNA_space_Ser_space_ 
// R03663: L_minus_Threonine <=> L_minus_Threonyl_minus_tRNA_space_Thr_space_ 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E6_space_1_space_1_space_3 = 0 M;
  real E6_space_1_space_1_space_14 = 0 M;
  real E6_space_1_space_1_space_11 = 0 M;
  real E2_space_1_space_2_space_1 = 0 M;
  real L_minus_Threonyl_minus_tRNA_space_Thr_space_(time) M;
  real Glycyl_minus_tRNA_space_Gly_space_(time) M;
  real L_minus_Seryl_minus_tRNA_space_Ser_space_(time) M;
  real Glycine(time) M;
  real L_minus_Serine(time) M;
  real L_minus_Threonine(time) M;
  real space_5_space_10_minus_Methylenetetrahydrofolate(time) M;
  real R00945(time) katal;
  extern real R00945.kf;
  extern real R00945.kb;
  real R03654(time) katal;
  extern real R03654.kf;
  extern real R03654.kb;
  real R03662(time) katal;
  extern real R03662.kf;
  extern real R03662.kb;
  real R03663(time) katal;
  extern real R03663.kf;
  extern real R03663.kb;

  // equations
  when (time=time.min) L_minus_Threonyl_minus_tRNA_space_Thr_space_ = 0;
  L_minus_Threonyl_minus_tRNA_space_Thr_space_:time = (R03663)/uVol;
  when (time=time.min) Glycyl_minus_tRNA_space_Gly_space_ = 0;
  Glycyl_minus_tRNA_space_Gly_space_:time = (R03654)/uVol;
  when (time=time.min) L_minus_Seryl_minus_tRNA_space_Ser_space_ = 0;
  L_minus_Seryl_minus_tRNA_space_Ser_space_:time = (R03662)/uVol;
  when (time=time.min) Glycine = 0;
  Glycine:time = (-1*R00945 + -1*R03654)/uVol;
  when (time=time.min) L_minus_Serine = 0;
  L_minus_Serine:time = (R00945 + -1*R03662)/uVol;
  when (time=time.min) L_minus_Threonine = 0;
  L_minus_Threonine:time = (-1*R03663)/uVol;
  when (time=time.min) space_5_space_10_minus_Methylenetetrahydrofolate = 0;
  space_5_space_10_minus_Methylenetetrahydrofolate:time = (-1*R00945)/uVol;
  R00945 = R00945.kf*space_5_space_10_minus_Methylenetetrahydrofolate*Glycine - R00945.kb*L_minus_Serine;
  R03654 = R03654.kf*Glycine - R03654.kb*Glycyl_minus_tRNA_space_Gly_space_;
  R03662 = R03662.kf*L_minus_Serine - R03662.kb*L_minus_Seryl_minus_tRNA_space_Ser_space_;
  R03663 = R03663.kf*L_minus_Threonine - R03663.kb*L_minus_Threonyl_minus_tRNA_space_Thr_space_;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E6_space_1_space_1_space_3.sbmlRole="species";
  E6_space_1_space_1_space_3.sbmlCompartment="uVol";
  E6_space_1_space_1_space_14.sbmlRole="species";
  E6_space_1_space_1_space_14.sbmlCompartment="uVol";
  E6_space_1_space_1_space_11.sbmlRole="species";
  E6_space_1_space_1_space_11.sbmlCompartment="uVol";
  E2_space_1_space_2_space_1.sbmlRole="species";
  E2_space_1_space_2_space_1.sbmlCompartment="uVol";
  L_minus_Threonyl_minus_tRNA_space_Thr_space_.sbmlRole="species";
  L_minus_Threonyl_minus_tRNA_space_Thr_space_.sbmlCompartment="uVol";
  Glycyl_minus_tRNA_space_Gly_space_.sbmlRole="species";
  Glycyl_minus_tRNA_space_Gly_space_.sbmlCompartment="uVol";
  L_minus_Seryl_minus_tRNA_space_Ser_space_.sbmlRole="species";
  L_minus_Seryl_minus_tRNA_space_Ser_space_.sbmlCompartment="uVol";
  Glycine.sbmlRole="species";
  Glycine.sbmlCompartment="uVol";
  L_minus_Serine.sbmlRole="species";
  L_minus_Serine.sbmlCompartment="uVol";
  L_minus_Threonine.sbmlRole="species";
  L_minus_Threonine.sbmlCompartment="uVol";
  space_5_space_10_minus_Methylenetetrahydrofolate.sbmlRole="species";
  space_5_space_10_minus_Methylenetetrahydrofolate.sbmlCompartment="uVol";
  R00945.sbmlRole="rate";
  R00945.kf.sbmlRole="rate";
  R00945.kb.sbmlRole="rate";
  R03654.sbmlRole="rate";
  R03654.kf.sbmlRole="rate";
  R03654.kb.sbmlRole="rate";
  R03662.sbmlRole="rate";
  R03662.kf.sbmlRole="rate";
  R03662.kb.sbmlRole="rate";
  R03663.sbmlRole="rate";
  R03663.kf.sbmlRole="rate";
  R03663.kb.sbmlRole="rate";
}