// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R00286: UDP_minus_glucose <=> UDP_minus_glucuronate 
// R02279: space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate => space_2_space_5_minus_Dioxopentanoate 
// R05850: L_minus_Ribulose_space_5_minus_phosphate <=> D_minus_Xylulose_space_5_minus_phosphate 
// R02957: D_minus_Glucuronolactone => D_minus_Glucarate 
// R08056: D_minus_Glucarate <=> space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate 
// R05608: D_minus_Galactarate => space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate 
// R07671: Ascorbate <=> L_minus_Ascorbate_space_6_minus_phosphate 
// R02752: D_minus_Glucarate => space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E2_space_7_space_1_space_69 = 0 M;
  real E1_space_1_space_1_space_22 = 0 M;
  real E1_space_2_space_1_space_3 = 0 M;
  real E5_space_1_space_3_space_4 = 0 M;
  real E4_space_2_space_1_space_40 = 0 M;
  real E4_space_2_space_1_space_42 = 0 M;
  real E4_space_2_space_1_space_41 = 0 M;
  real L_minus_Ribulose_space_5_minus_phosphate(time) M;
  real L_minus_Ascorbate_space_6_minus_phosphate(time) M;
  real Ascorbate(time) M;
  real D_minus_Xylulose_space_5_minus_phosphate(time) M;
  real UDP_minus_glucuronate(time) M;
  real UDP_minus_glucose(time) M;
  real D_minus_Glucuronolactone(time) M;
  real D_minus_Glucarate(time) M;
  real D_minus_Galactarate(time) M;
  real space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate(time) M;
  real space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate(time) M;
  real space_2_space_5_minus_Dioxopentanoate(time) M;
  real R00286(time) katal;
  extern real R00286.kf;
  extern real R00286.kb;
  real R02279(time) katal;
  extern real R02279.kf;
  extern real R02279.kb;
  real R05850(time) katal;
  extern real R05850.kf;
  extern real R05850.kb;
  real R02957(time) katal;
  extern real R02957.kf;
  extern real R02957.kb;
  real R08056(time) katal;
  extern real R08056.kf;
  extern real R08056.kb;
  real R05608(time) katal;
  extern real R05608.kf;
  extern real R05608.kb;
  real R07671(time) katal;
  extern real R07671.kf;
  extern real R07671.kb;
  real R02752(time) katal;
  extern real R02752.kf;
  extern real R02752.kb;

  // equations
  when (time=time.min) L_minus_Ribulose_space_5_minus_phosphate = 0;
  L_minus_Ribulose_space_5_minus_phosphate:time = (-1*R05850)/uVol;
  when (time=time.min) L_minus_Ascorbate_space_6_minus_phosphate = 0;
  L_minus_Ascorbate_space_6_minus_phosphate:time = (R07671)/uVol;
  when (time=time.min) Ascorbate = 0;
  Ascorbate:time = (-1*R07671)/uVol;
  when (time=time.min) D_minus_Xylulose_space_5_minus_phosphate = 0;
  D_minus_Xylulose_space_5_minus_phosphate:time = (R05850)/uVol;
  when (time=time.min) UDP_minus_glucuronate = 0;
  UDP_minus_glucuronate:time = (R00286)/uVol;
  when (time=time.min) UDP_minus_glucose = 0;
  UDP_minus_glucose:time = (-1*R00286)/uVol;
  when (time=time.min) D_minus_Glucuronolactone = 0;
  D_minus_Glucuronolactone:time = (-1*R02957)/uVol;
  when (time=time.min) D_minus_Glucarate = 0;
  D_minus_Glucarate:time = (R02957 + -1*R08056 + -1*R02752)/uVol;
  when (time=time.min) D_minus_Galactarate = 0;
  D_minus_Galactarate:time = (-1*R05608)/uVol;
  when (time=time.min) space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate = 0;
  space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate:time = (R08056)/uVol;
  when (time=time.min) space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate = 0;
  space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate:time = (-1*R02279 + R05608 + R02752)/uVol;
  when (time=time.min) space_2_space_5_minus_Dioxopentanoate = 0;
  space_2_space_5_minus_Dioxopentanoate:time = (R02279)/uVol;
  R00286 = R00286.kf*UDP_minus_glucose - R00286.kb*UDP_minus_glucuronate;
  R02279 = R02279.kf*space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate - R02279.kb*space_2_space_5_minus_Dioxopentanoate;
  R05850 = R05850.kf*L_minus_Ribulose_space_5_minus_phosphate - R05850.kb*D_minus_Xylulose_space_5_minus_phosphate;
  R02957 = R02957.kf*D_minus_Glucuronolactone - R02957.kb*D_minus_Glucarate;
  R08056 = R08056.kf*D_minus_Glucarate - R08056.kb*space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate;
  R05608 = R05608.kf*D_minus_Galactarate - R05608.kb*space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate;
  R07671 = R07671.kf*Ascorbate - R07671.kb*L_minus_Ascorbate_space_6_minus_phosphate;
  R02752 = R02752.kf*D_minus_Glucarate - R02752.kb*space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E2_space_7_space_1_space_69.sbmlRole="species";
  E2_space_7_space_1_space_69.sbmlCompartment="uVol";
  E1_space_1_space_1_space_22.sbmlRole="species";
  E1_space_1_space_1_space_22.sbmlCompartment="uVol";
  E1_space_2_space_1_space_3.sbmlRole="species";
  E1_space_2_space_1_space_3.sbmlCompartment="uVol";
  E5_space_1_space_3_space_4.sbmlRole="species";
  E5_space_1_space_3_space_4.sbmlCompartment="uVol";
  E4_space_2_space_1_space_40.sbmlRole="species";
  E4_space_2_space_1_space_40.sbmlCompartment="uVol";
  E4_space_2_space_1_space_42.sbmlRole="species";
  E4_space_2_space_1_space_42.sbmlCompartment="uVol";
  E4_space_2_space_1_space_41.sbmlRole="species";
  E4_space_2_space_1_space_41.sbmlCompartment="uVol";
  L_minus_Ribulose_space_5_minus_phosphate.sbmlRole="species";
  L_minus_Ribulose_space_5_minus_phosphate.sbmlCompartment="uVol";
  L_minus_Ascorbate_space_6_minus_phosphate.sbmlRole="species";
  L_minus_Ascorbate_space_6_minus_phosphate.sbmlCompartment="uVol";
  Ascorbate.sbmlRole="species";
  Ascorbate.sbmlCompartment="uVol";
  D_minus_Xylulose_space_5_minus_phosphate.sbmlRole="species";
  D_minus_Xylulose_space_5_minus_phosphate.sbmlCompartment="uVol";
  UDP_minus_glucuronate.sbmlRole="species";
  UDP_minus_glucuronate.sbmlCompartment="uVol";
  UDP_minus_glucose.sbmlRole="species";
  UDP_minus_glucose.sbmlCompartment="uVol";
  D_minus_Glucuronolactone.sbmlRole="species";
  D_minus_Glucuronolactone.sbmlCompartment="uVol";
  D_minus_Glucarate.sbmlRole="species";
  D_minus_Glucarate.sbmlCompartment="uVol";
  D_minus_Galactarate.sbmlRole="species";
  D_minus_Galactarate.sbmlCompartment="uVol";
  space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate.sbmlRole="species";
  space_2_minus_Dehydro_minus_3_minus_deoxy_minus_D_minus_glucarate.sbmlCompartment="uVol";
  space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate.sbmlRole="species";
  space_5_minus_Dehydro_minus_4_minus_deoxy_minus_D_minus_glucarate.sbmlCompartment="uVol";
  space_2_space_5_minus_Dioxopentanoate.sbmlRole="species";
  space_2_space_5_minus_Dioxopentanoate.sbmlCompartment="uVol";
  R00286.sbmlRole="rate";
  R00286.kf.sbmlRole="rate";
  R00286.kb.sbmlRole="rate";
  R02279.sbmlRole="rate";
  R02279.kf.sbmlRole="rate";
  R02279.kb.sbmlRole="rate";
  R05850.sbmlRole="rate";
  R05850.kf.sbmlRole="rate";
  R05850.kb.sbmlRole="rate";
  R02957.sbmlRole="rate";
  R02957.kf.sbmlRole="rate";
  R02957.kb.sbmlRole="rate";
  R08056.sbmlRole="rate";
  R08056.kf.sbmlRole="rate";
  R08056.kb.sbmlRole="rate";
  R05608.sbmlRole="rate";
  R05608.kf.sbmlRole="rate";
  R05608.kb.sbmlRole="rate";
  R07671.sbmlRole="rate";
  R07671.kf.sbmlRole="rate";
  R07671.kb.sbmlRole="rate";
  R02752.sbmlRole="rate";
  R02752.kf.sbmlRole="rate";
  R02752.kb.sbmlRole="rate";
}