// This model generated automatically from SBML // unit definitions import nsrunit; unit conversion off; // SBML property definitions property sbmlRole=string; property sbmlName=string; property sbmlCompartment=string; // SBML reactions // R05549: D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose <=> D_minus_Galactose Melibiose // R03635: Stachyose <=> D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose D_minus_Fructose // R01101: Melibiose <=> D_minus_Galactose D_minus_Glucose // R00801: Sucrose <=> D_minus_Fructose D_minus_Glucose // R01105: Galactan <=> D_minus_Galactose // R01678: Lactose <=> alpha_minus_D_minus_Glucose D_minus_Galactose // R03634: Stachyose <=> Raffinose D_minus_Galactose // R00502: alpha_minus_D_minus_Galactose_space_1_minus_phosphate <=> UDP_minus_D_minus_galactose // R02926: D_minus_Galactose D_minus_Sorbitol => Melibiitol // R01329: D_minus_Galactose D_minus_Mannose => Epimelibiose // R02410: Raffinose <=> Melibiose D_minus_Fructose // R01103: Raffinose <=> D_minus_Galactose Sucrose // R01786: alpha_minus_D_minus_Glucose => alpha_minus_D_minus_Glucose_space_6_minus_phosphate // R01104: D_minus_Galactose Glycerol => space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol // R01194: D_minus_Galactose myo_minus_Inositol => space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol // R01092: D_minus_Galactose => alpha_minus_D_minus_Galactose_space_1_minus_phosphate // R00959: D_minus_Glucose_space_1_minus_phosphate => alpha_minus_D_minus_Glucose_space_6_minus_phosphate // R00289: D_minus_Glucose_space_1_minus_phosphate => UDP_minus_glucose // R00291: UDP_minus_glucose => UDP_minus_D_minus_galactose math main { realDomain time second; time.min=0; extern time.max; extern time.delta; // variable definitions real default = 1 L; real uVol = 1 L; real E2_space_7_space_1_space_6 = 0 M; real E3_space_2_space_1_space_23 = 0 M; real E2_space_7_space_7_space_10 = 0 M; real E2_space_7_space_1_space_2 = 0 M; real E2_space_7_space_7_space_9 = 0 M; real E5_space_4_space_2_space_2 = 0 M; real E5_space_1_space_3_space_2 = 0 M; real E3_space_2_space_1_space_26 = 0 M; real E3_space_2_space_1_space_22 = 0 M; real E3_space_2_space_1_space_20 = 0 M; real Epimelibiose(time) M; real space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol(time) M; real space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol(time) M; real Melibiitol(time) M; real Galactan(time) M; real alpha_minus_D_minus_Galactose_space_1_minus_phosphate(time) M; real Lactose(time) M; real UDP_minus_D_minus_galactose(time) M; real alpha_minus_D_minus_Glucose(time) M; real UDP_minus_glucose(time) M; real D_minus_Glucose_space_1_minus_phosphate(time) M; real alpha_minus_D_minus_Glucose_space_6_minus_phosphate(time) M; real Raffinose(time) M; real Stachyose(time) M; real D_minus_Galactose(time) M; real Glycerol(time) M; real D_minus_Fructose(time) M; real Melibiose(time) M; real Sucrose(time) M; real D_minus_Sorbitol(time) M; real D_minus_Mannose(time) M; real myo_minus_Inositol(time) M; real D_minus_Glucose(time) M; real D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose(time) M; real R05549(time) katal; extern real R05549.kf; extern real R05549.kb; real R03635(time) katal; extern real R03635.kf; extern real R03635.kb; real R01101(time) katal; extern real R01101.kf; extern real R01101.kb; real R00801(time) katal; extern real R00801.kf; extern real R00801.kb; real R01105(time) katal; extern real R01105.kf; extern real R01105.kb; real R01678(time) katal; extern real R01678.kf; extern real R01678.kb; real R03634(time) katal; extern real R03634.kf; extern real R03634.kb; real R00502(time) katal; extern real R00502.kf; extern real R00502.kb; real R02926(time) katal; extern real R02926.kf; extern real R02926.kb; real R01329(time) katal; extern real R01329.kf; extern real R01329.kb; real R02410(time) katal; extern real R02410.kf; extern real R02410.kb; real R01103(time) katal; extern real R01103.kf; extern real R01103.kb; real R01786(time) katal; extern real R01786.kf; extern real R01786.kb; real R01104(time) katal; extern real R01104.kf; extern real R01104.kb; real R01194(time) katal; extern real R01194.kf; extern real R01194.kb; real R01092(time) katal; extern real R01092.kf; extern real R01092.kb; real R00959(time) katal; extern real R00959.kf; extern real R00959.kb; real R00289(time) katal; extern real R00289.kf; extern real R00289.kb; real R00291(time) katal; extern real R00291.kf; extern real R00291.kb; // equations when (time=time.min) Epimelibiose = 0; Epimelibiose:time = (R01329)/uVol; when (time=time.min) space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol = 0; space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol:time = (R01104)/uVol; when (time=time.min) space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol = 0; space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol:time = (R01194)/uVol; when (time=time.min) Melibiitol = 0; Melibiitol:time = (R02926)/uVol; when (time=time.min) Galactan = 0; Galactan:time = (-1*R01105)/uVol; when (time=time.min) alpha_minus_D_minus_Galactose_space_1_minus_phosphate = 0; alpha_minus_D_minus_Galactose_space_1_minus_phosphate:time = (-1*R00502 + R01092)/uVol; when (time=time.min) Lactose = 0; Lactose:time = (-1*R01678)/uVol; when (time=time.min) UDP_minus_D_minus_galactose = 0; UDP_minus_D_minus_galactose:time = (R00502 + R00291)/uVol; when (time=time.min) alpha_minus_D_minus_Glucose = 0; alpha_minus_D_minus_Glucose:time = (R01678 + -1*R01786)/uVol; when (time=time.min) UDP_minus_glucose = 0; UDP_minus_glucose:time = (R00289 + -1*R00291)/uVol; when (time=time.min) D_minus_Glucose_space_1_minus_phosphate = 0; D_minus_Glucose_space_1_minus_phosphate:time = (-1*R00959 + -1*R00289)/uVol; when (time=time.min) alpha_minus_D_minus_Glucose_space_6_minus_phosphate = 0; alpha_minus_D_minus_Glucose_space_6_minus_phosphate:time = (R01786 + R00959)/uVol; when (time=time.min) Raffinose = 0; Raffinose:time = (R03634 + -1*R02410 + -1*R01103)/uVol; when (time=time.min) Stachyose = 0; Stachyose:time = (-1*R03635 + -1*R03634)/uVol; when (time=time.min) D_minus_Galactose = 0; D_minus_Galactose:time = (R05549 + R01101 + R01105 + R01678 + R03634 + -1*R02926 + -1*R01329 + R01103 + -1*R01104 + -1*R01194 + -1*R01092)/uVol; when (time=time.min) Glycerol = 0; Glycerol:time = (-1*R01104)/uVol; when (time=time.min) D_minus_Fructose = 0; D_minus_Fructose:time = (R03635 + R00801 + R02410)/uVol; when (time=time.min) Melibiose = 0; Melibiose:time = (R05549 + -1*R01101 + R02410)/uVol; when (time=time.min) Sucrose = 0; Sucrose:time = (-1*R00801 + R01103)/uVol; when (time=time.min) D_minus_Sorbitol = 0; D_minus_Sorbitol:time = (-1*R02926)/uVol; when (time=time.min) D_minus_Mannose = 0; D_minus_Mannose:time = (-1*R01329)/uVol; when (time=time.min) myo_minus_Inositol = 0; myo_minus_Inositol:time = (-1*R01194)/uVol; when (time=time.min) D_minus_Glucose = 0; D_minus_Glucose:time = (R01101 + R00801)/uVol; when (time=time.min) D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose = 0; D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose:time = (-1*R05549 + R03635)/uVol; R05549 = R05549.kf*D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose - R05549.kb*D_minus_Galactose*Melibiose; R03635 = R03635.kf*Stachyose - R03635.kb*D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose*D_minus_Fructose; R01101 = R01101.kf*Melibiose - R01101.kb*D_minus_Galactose*D_minus_Glucose; R00801 = R00801.kf*Sucrose - R00801.kb*D_minus_Fructose*D_minus_Glucose; R01105 = R01105.kf*Galactan - R01105.kb*D_minus_Galactose; R01678 = R01678.kf*Lactose - R01678.kb*alpha_minus_D_minus_Glucose*D_minus_Galactose; R03634 = R03634.kf*Stachyose - R03634.kb*Raffinose*D_minus_Galactose; R00502 = R00502.kf*alpha_minus_D_minus_Galactose_space_1_minus_phosphate - R00502.kb*UDP_minus_D_minus_galactose; R02926 = R02926.kf*D_minus_Galactose*D_minus_Sorbitol - R02926.kb*Melibiitol; R01329 = R01329.kf*D_minus_Galactose*D_minus_Mannose - R01329.kb*Epimelibiose; R02410 = R02410.kf*Raffinose - R02410.kb*Melibiose*D_minus_Fructose; R01103 = R01103.kf*Raffinose - R01103.kb*D_minus_Galactose*Sucrose; R01786 = R01786.kf*alpha_minus_D_minus_Glucose - R01786.kb*alpha_minus_D_minus_Glucose_space_6_minus_phosphate; R01104 = R01104.kf*D_minus_Galactose*Glycerol - R01104.kb*space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol; R01194 = R01194.kf*D_minus_Galactose*myo_minus_Inositol - R01194.kb*space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol; R01092 = R01092.kf*D_minus_Galactose - R01092.kb*alpha_minus_D_minus_Galactose_space_1_minus_phosphate; R00959 = R00959.kf*D_minus_Glucose_space_1_minus_phosphate - R00959.kb*alpha_minus_D_minus_Glucose_space_6_minus_phosphate; R00289 = R00289.kf*D_minus_Glucose_space_1_minus_phosphate - R00289.kb*UDP_minus_glucose; R00291 = R00291.kf*UDP_minus_glucose - R00291.kb*UDP_minus_D_minus_galactose; // variable properties default.sbmlRole="compartment"; uVol.sbmlRole="compartment"; E2_space_7_space_1_space_6.sbmlRole="species"; E2_space_7_space_1_space_6.sbmlCompartment="uVol"; E3_space_2_space_1_space_23.sbmlRole="species"; E3_space_2_space_1_space_23.sbmlCompartment="uVol"; E2_space_7_space_7_space_10.sbmlRole="species"; E2_space_7_space_7_space_10.sbmlCompartment="uVol"; E2_space_7_space_1_space_2.sbmlRole="species"; E2_space_7_space_1_space_2.sbmlCompartment="uVol"; E2_space_7_space_7_space_9.sbmlRole="species"; E2_space_7_space_7_space_9.sbmlCompartment="uVol"; E5_space_4_space_2_space_2.sbmlRole="species"; E5_space_4_space_2_space_2.sbmlCompartment="uVol"; E5_space_1_space_3_space_2.sbmlRole="species"; E5_space_1_space_3_space_2.sbmlCompartment="uVol"; E3_space_2_space_1_space_26.sbmlRole="species"; E3_space_2_space_1_space_26.sbmlCompartment="uVol"; E3_space_2_space_1_space_22.sbmlRole="species"; E3_space_2_space_1_space_22.sbmlCompartment="uVol"; E3_space_2_space_1_space_20.sbmlRole="species"; E3_space_2_space_1_space_20.sbmlCompartment="uVol"; Epimelibiose.sbmlRole="species"; Epimelibiose.sbmlCompartment="uVol"; space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol.sbmlRole="species"; space_3_minus_beta_minus_D_minus_Galactosyl_minus_sn_minus_glycerol.sbmlCompartment="uVol"; space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol.sbmlRole="species"; space_1_minus_alpha_minus_D_minus_Galactosyl_minus_myo_minus_inositol.sbmlCompartment="uVol"; Melibiitol.sbmlRole="species"; Melibiitol.sbmlCompartment="uVol"; Galactan.sbmlRole="species"; Galactan.sbmlCompartment="uVol"; alpha_minus_D_minus_Galactose_space_1_minus_phosphate.sbmlRole="species"; alpha_minus_D_minus_Galactose_space_1_minus_phosphate.sbmlCompartment="uVol"; Lactose.sbmlRole="species"; Lactose.sbmlCompartment="uVol"; UDP_minus_D_minus_galactose.sbmlRole="species"; UDP_minus_D_minus_galactose.sbmlCompartment="uVol"; alpha_minus_D_minus_Glucose.sbmlRole="species"; alpha_minus_D_minus_Glucose.sbmlCompartment="uVol"; UDP_minus_glucose.sbmlRole="species"; UDP_minus_glucose.sbmlCompartment="uVol"; D_minus_Glucose_space_1_minus_phosphate.sbmlRole="species"; D_minus_Glucose_space_1_minus_phosphate.sbmlCompartment="uVol"; alpha_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlRole="species"; alpha_minus_D_minus_Glucose_space_6_minus_phosphate.sbmlCompartment="uVol"; Raffinose.sbmlRole="species"; Raffinose.sbmlCompartment="uVol"; Stachyose.sbmlRole="species"; Stachyose.sbmlCompartment="uVol"; D_minus_Galactose.sbmlRole="species"; D_minus_Galactose.sbmlCompartment="uVol"; Glycerol.sbmlRole="species"; Glycerol.sbmlCompartment="uVol"; D_minus_Fructose.sbmlRole="species"; D_minus_Fructose.sbmlCompartment="uVol"; Melibiose.sbmlRole="species"; Melibiose.sbmlCompartment="uVol"; Sucrose.sbmlRole="species"; Sucrose.sbmlCompartment="uVol"; D_minus_Sorbitol.sbmlRole="species"; D_minus_Sorbitol.sbmlCompartment="uVol"; D_minus_Mannose.sbmlRole="species"; D_minus_Mannose.sbmlCompartment="uVol"; myo_minus_Inositol.sbmlRole="species"; myo_minus_Inositol.sbmlCompartment="uVol"; D_minus_Glucose.sbmlRole="species"; D_minus_Glucose.sbmlCompartment="uVol"; D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose.sbmlRole="species"; D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Gal_space_alpha_space_1_minus_space_6D_minus_Glucose.sbmlCompartment="uVol"; R05549.sbmlRole="rate"; R05549.kf.sbmlRole="rate"; R05549.kb.sbmlRole="rate"; R03635.sbmlRole="rate"; R03635.kf.sbmlRole="rate"; R03635.kb.sbmlRole="rate"; R01101.sbmlRole="rate"; R01101.kf.sbmlRole="rate"; R01101.kb.sbmlRole="rate"; R00801.sbmlRole="rate"; R00801.kf.sbmlRole="rate"; R00801.kb.sbmlRole="rate"; R01105.sbmlRole="rate"; R01105.kf.sbmlRole="rate"; R01105.kb.sbmlRole="rate"; R01678.sbmlRole="rate"; R01678.kf.sbmlRole="rate"; R01678.kb.sbmlRole="rate"; R03634.sbmlRole="rate"; R03634.kf.sbmlRole="rate"; R03634.kb.sbmlRole="rate"; R00502.sbmlRole="rate"; R00502.kf.sbmlRole="rate"; R00502.kb.sbmlRole="rate"; R02926.sbmlRole="rate"; R02926.kf.sbmlRole="rate"; R02926.kb.sbmlRole="rate"; R01329.sbmlRole="rate"; R01329.kf.sbmlRole="rate"; R01329.kb.sbmlRole="rate"; R02410.sbmlRole="rate"; R02410.kf.sbmlRole="rate"; R02410.kb.sbmlRole="rate"; R01103.sbmlRole="rate"; R01103.kf.sbmlRole="rate"; R01103.kb.sbmlRole="rate"; R01786.sbmlRole="rate"; R01786.kf.sbmlRole="rate"; R01786.kb.sbmlRole="rate"; R01104.sbmlRole="rate"; R01104.kf.sbmlRole="rate"; R01104.kb.sbmlRole="rate"; R01194.sbmlRole="rate"; R01194.kf.sbmlRole="rate"; R01194.kb.sbmlRole="rate"; R01092.sbmlRole="rate"; R01092.kf.sbmlRole="rate"; R01092.kb.sbmlRole="rate"; R00959.sbmlRole="rate"; R00959.kf.sbmlRole="rate"; R00959.kb.sbmlRole="rate"; R00289.sbmlRole="rate"; R00289.kf.sbmlRole="rate"; R00289.kb.sbmlRole="rate"; R00291.sbmlRole="rate"; R00291.kf.sbmlRole="rate"; R00291.kb.sbmlRole="rate"; }