// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R05617: space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate => space_2_minus_Demethylmenaquinone 
// R06858: space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate <=> space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E2_space_5_space_1_space_minus_ = 0 M;
  real space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate(time) M;
  real space_2_minus_Demethylmenaquinone(time) M;
  real space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone(time) M;
  real R05617(time) katal;
  extern real R05617.kf;
  extern real R05617.kb;
  real R06858(time) katal;
  extern real R06858.kf;
  extern real R06858.kb;

  // equations
  when (time=time.min) space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate = 0;
  space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate:time = (-1*R05617 + -1*R06858)/uVol;
  when (time=time.min) space_2_minus_Demethylmenaquinone = 0;
  space_2_minus_Demethylmenaquinone:time = (R05617)/uVol;
  when (time=time.min) space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone = 0;
  space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone:time = (R06858)/uVol;
  R05617 = R05617.kf*space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate - R05617.kb*space_2_minus_Demethylmenaquinone;
  R06858 = R06858.kf*space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate - R06858.kb*space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E2_space_5_space_1_space_minus_.sbmlRole="species";
  E2_space_5_space_1_space_minus_.sbmlCompartment="uVol";
  space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate.sbmlRole="species";
  space_1_space_4_minus_Dihydroxy_minus_2_minus_naphthoate.sbmlCompartment="uVol";
  space_2_minus_Demethylmenaquinone.sbmlRole="species";
  space_2_minus_Demethylmenaquinone.sbmlCompartment="uVol";
  space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone.sbmlRole="species";
  space_2_minus_Phytyl_minus_1_space_4_minus_naphthoquinone.sbmlCompartment="uVol";
  R05617.sbmlRole="rate";
  R05617.kf.sbmlRole="rate";
  R05617.kb.sbmlRole="rate";
  R06858.sbmlRole="rate";
  R06858.kf.sbmlRole="rate";
  R06858.kb.sbmlRole="rate";
}