// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R01214: L_minus_Valine <=> space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid 
// R01090: L_minus_Leucine <=> space_4_minus_Methyl_minus_2_minus_oxopentanoate 
// R07618: Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine <=> Enzyme_space_N6_minus_space_lipoyl_space_lysine 
// R01859: Propanoyl_minus_CoA <=> space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA 
// R02199: L_minus_Isoleucine <=> space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid 
// R03869: space_S_space_minus_Methylmalonate_space_semialdehyde <=> Methylmalonate 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E2_space_6_space_1_space_42 = 0 M;
  real E1_space_8_space_1_space_4 = 0 M;
  real E1_space_2_space_1_space_3 = 0 M;
  real E6_space_4_space_1_space_3 = 0 M;
  real L_minus_Leucine(time) M;
  real space_4_minus_Methyl_minus_2_minus_oxopentanoate(time) M;
  real Enzyme_space_N6_minus_space_lipoyl_space_lysine(time) M;
  real Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine(time) M;
  real L_minus_Valine(time) M;
  real space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid(time) M;
  real space_S_space_minus_Methylmalonate_space_semialdehyde(time) M;
  real Methylmalonate(time) M;
  real L_minus_Isoleucine(time) M;
  real space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid(time) M;
  real Propanoyl_minus_CoA(time) M;
  real space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA(time) M;
  real R01214(time) katal;
  extern real R01214.kf;
  extern real R01214.kb;
  real R01090(time) katal;
  extern real R01090.kf;
  extern real R01090.kb;
  real R07618(time) katal;
  extern real R07618.kf;
  extern real R07618.kb;
  real R01859(time) katal;
  extern real R01859.kf;
  extern real R01859.kb;
  real R02199(time) katal;
  extern real R02199.kf;
  extern real R02199.kb;
  real R03869(time) katal;
  extern real R03869.kf;
  extern real R03869.kb;

  // equations
  when (time=time.min) L_minus_Leucine = 0;
  L_minus_Leucine:time = (-1*R01090)/uVol;
  when (time=time.min) space_4_minus_Methyl_minus_2_minus_oxopentanoate = 0;
  space_4_minus_Methyl_minus_2_minus_oxopentanoate:time = (R01090)/uVol;
  when (time=time.min) Enzyme_space_N6_minus_space_lipoyl_space_lysine = 0;
  Enzyme_space_N6_minus_space_lipoyl_space_lysine:time = (R07618)/uVol;
  when (time=time.min) Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine = 0;
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine:time = (-1*R07618)/uVol;
  when (time=time.min) L_minus_Valine = 0;
  L_minus_Valine:time = (-1*R01214)/uVol;
  when (time=time.min) space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid = 0;
  space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid:time = (R01214)/uVol;
  when (time=time.min) space_S_space_minus_Methylmalonate_space_semialdehyde = 0;
  space_S_space_minus_Methylmalonate_space_semialdehyde:time = (-1*R03869)/uVol;
  when (time=time.min) Methylmalonate = 0;
  Methylmalonate:time = (R03869)/uVol;
  when (time=time.min) L_minus_Isoleucine = 0;
  L_minus_Isoleucine:time = (-1*R02199)/uVol;
  when (time=time.min) space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid = 0;
  space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid:time = (R02199)/uVol;
  when (time=time.min) Propanoyl_minus_CoA = 0;
  Propanoyl_minus_CoA:time = (-1*R01859)/uVol;
  when (time=time.min) space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA = 0;
  space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA:time = (R01859)/uVol;
  R01214 = R01214.kf*L_minus_Valine - R01214.kb*space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid;
  R01090 = R01090.kf*L_minus_Leucine - R01090.kb*space_4_minus_Methyl_minus_2_minus_oxopentanoate;
  R07618 = R07618.kf*Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine - R07618.kb*Enzyme_space_N6_minus_space_lipoyl_space_lysine;
  R01859 = R01859.kf*Propanoyl_minus_CoA - R01859.kb*space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA;
  R02199 = R02199.kf*L_minus_Isoleucine - R02199.kb*space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid;
  R03869 = R03869.kf*space_S_space_minus_Methylmalonate_space_semialdehyde - R03869.kb*Methylmalonate;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E2_space_6_space_1_space_42.sbmlRole="species";
  E2_space_6_space_1_space_42.sbmlCompartment="uVol";
  E1_space_8_space_1_space_4.sbmlRole="species";
  E1_space_8_space_1_space_4.sbmlCompartment="uVol";
  E1_space_2_space_1_space_3.sbmlRole="species";
  E1_space_2_space_1_space_3.sbmlCompartment="uVol";
  E6_space_4_space_1_space_3.sbmlRole="species";
  E6_space_4_space_1_space_3.sbmlCompartment="uVol";
  L_minus_Leucine.sbmlRole="species";
  L_minus_Leucine.sbmlCompartment="uVol";
  space_4_minus_Methyl_minus_2_minus_oxopentanoate.sbmlRole="species";
  space_4_minus_Methyl_minus_2_minus_oxopentanoate.sbmlCompartment="uVol";
  Enzyme_space_N6_minus_space_lipoyl_space_lysine.sbmlRole="species";
  Enzyme_space_N6_minus_space_lipoyl_space_lysine.sbmlCompartment="uVol";
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine.sbmlRole="species";
  Enzyme_space_N6_minus_space_dihydrolipoyl_space_lysine.sbmlCompartment="uVol";
  L_minus_Valine.sbmlRole="species";
  L_minus_Valine.sbmlCompartment="uVol";
  space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid.sbmlRole="species";
  space_3_minus_Methyl_minus_2_minus_oxobutanoic_space_acid.sbmlCompartment="uVol";
  space_S_space_minus_Methylmalonate_space_semialdehyde.sbmlRole="species";
  space_S_space_minus_Methylmalonate_space_semialdehyde.sbmlCompartment="uVol";
  Methylmalonate.sbmlRole="species";
  Methylmalonate.sbmlCompartment="uVol";
  L_minus_Isoleucine.sbmlRole="species";
  L_minus_Isoleucine.sbmlCompartment="uVol";
  space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid.sbmlRole="species";
  space_S_space_minus_3_minus_Methyl_minus_2_minus_oxopentanoic_space_acid.sbmlCompartment="uVol";
  Propanoyl_minus_CoA.sbmlRole="species";
  Propanoyl_minus_CoA.sbmlCompartment="uVol";
  space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA.sbmlRole="species";
  space_S_space_minus_2_minus_Methyl_minus_3_minus_oxopropanoyl_minus_CoA.sbmlCompartment="uVol";
  R01214.sbmlRole="rate";
  R01214.kf.sbmlRole="rate";
  R01214.kb.sbmlRole="rate";
  R01090.sbmlRole="rate";
  R01090.kf.sbmlRole="rate";
  R01090.kb.sbmlRole="rate";
  R07618.sbmlRole="rate";
  R07618.kf.sbmlRole="rate";
  R07618.kb.sbmlRole="rate";
  R01859.sbmlRole="rate";
  R01859.kf.sbmlRole="rate";
  R01859.kb.sbmlRole="rate";
  R02199.sbmlRole="rate";
  R02199.kf.sbmlRole="rate";
  R02199.kb.sbmlRole="rate";
  R03869.sbmlRole="rate";
  R03869.kf.sbmlRole="rate";
  R03869.kb.sbmlRole="rate";
}