// This model generated automatically from SBML
// WARNING: Renamed variable _space_4_minus_Nitrophenol to xxx_space_4_minus_Nitrophenol due to JSim namespace restrictions
// WARNING: Renamed variable _space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone to xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone due to JSim namespace restrictions
// WARNING: Renamed variable _space_4_minus_Nitrophenyl_space_phosphate to xxx_space_4_minus_Nitrophenyl_space_phosphate due to JSim namespace restrictions

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R03024: _space_4_minus_Nitrophenyl_space_phosphate <=> _space_4_minus_Nitrophenol 
// R06853: Benzene_minus_1_space_2_space_4_minus_triol <=> _space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone 
// R06854: _space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone <=> p_minus_Benzoquinone 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E1_space_1_space__minus__space__minus_ = 0 M;
  real E3_space_1_space_3_space_1 = 0 M;
  real xxx_space_4_minus_Nitrophenol(time) M;
  real p_minus_Benzoquinone(time) M;
  real xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone(time) M;
  real Benzene_minus_1_space_2_space_4_minus_triol(time) M;
  real xxx_space_4_minus_Nitrophenyl_space_phosphate(time) M;
  real R03024(time) katal;
  extern real R03024.kf;
  extern real R03024.kb;
  real R06853(time) katal;
  extern real R06853.kf;
  extern real R06853.kb;
  real R06854(time) katal;
  extern real R06854.kf;
  extern real R06854.kb;

  // equations
  when (time=time.min) xxx_space_4_minus_Nitrophenol = 0;
  (xxx_space_4_minus_Nitrophenol*uVol):time = R03024;
  when (time=time.min) p_minus_Benzoquinone = 0;
  (p_minus_Benzoquinone*uVol):time = R06854;
  when (time=time.min) xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone = 0;
  (xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone*uVol):time = R06853 + -1*R06854;
  when (time=time.min) Benzene_minus_1_space_2_space_4_minus_triol = 0;
  (Benzene_minus_1_space_2_space_4_minus_triol*uVol):time = -1*R06853;
  when (time=time.min) xxx_space_4_minus_Nitrophenyl_space_phosphate = 0;
  (xxx_space_4_minus_Nitrophenyl_space_phosphate*uVol):time = -1*R03024;
  R03024 = R03024.kf*_space_4_minus_Nitrophenyl_space_phosphate - R03024.kb*_space_4_minus_Nitrophenol;
  R06853 = R06853.kf*Benzene_minus_1_space_2_space_4_minus_triol - R06853.kb*_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone;
  R06854 = R06854.kf*_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone - R06854.kb*p_minus_Benzoquinone;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E1_space_1_space__minus__space__minus_.sbmlRole="species";
  E1_space_1_space__minus__space__minus_.sbmlCompartment="uVol";
  E3_space_1_space_3_space_1.sbmlRole="species";
  E3_space_1_space_3_space_1.sbmlCompartment="uVol";
  xxx_space_4_minus_Nitrophenol.sbmlRole="species";
  xxx_space_4_minus_Nitrophenol.sbmlName="_space_4_minus_Nitrophenol";
  xxx_space_4_minus_Nitrophenol.sbmlCompartment="uVol";
  p_minus_Benzoquinone.sbmlRole="species";
  p_minus_Benzoquinone.sbmlCompartment="uVol";
  xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone.sbmlRole="species";
  xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone.sbmlName="_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone";
  xxx_space_2_minus_Hydroxy_minus_1_space_4_minus_benzoquinone.sbmlCompartment="uVol";
  Benzene_minus_1_space_2_space_4_minus_triol.sbmlRole="species";
  Benzene_minus_1_space_2_space_4_minus_triol.sbmlCompartment="uVol";
  xxx_space_4_minus_Nitrophenyl_space_phosphate.sbmlRole="species";
  xxx_space_4_minus_Nitrophenyl_space_phosphate.sbmlName="_space_4_minus_Nitrophenyl_space_phosphate";
  xxx_space_4_minus_Nitrophenyl_space_phosphate.sbmlCompartment="uVol";
  R03024.sbmlRole="rate";
  R03024.kf.sbmlRole="rate";
  R03024.kb.sbmlRole="rate";
  R06853.sbmlRole="rate";
  R06853.kf.sbmlRole="rate";
  R06853.kb.sbmlRole="rate";
  R06854.sbmlRole="rate";
  R06854.kf.sbmlRole="rate";
  R06854.kb.sbmlRole="rate";
}