// This model generated automatically from SBML
// WARNING: Renamed variable _space_4_space_6_minus_Dihydroxyquinoline to xxx_space_4_space_6_minus_Dihydroxyquinoline due to JSim namespace restrictions
// WARNING: Renamed variable _space_5_minus_Hydroxykynurenamine to xxx_space_5_minus_Hydroxykynurenamine due to JSim namespace restrictions
// WARNING: Renamed variable _space_3_minus_Hydroxykynurenamine to xxx_space_3_minus_Hydroxykynurenamine due to JSim namespace restrictions
// WARNING: Renamed variable _space_4_space_8_minus_Dihydroxyquinoline to xxx_space_4_space_8_minus_Dihydroxyquinoline due to JSim namespace restrictions
// WARNING: Renamed variable _space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol to xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol due to JSim namespace restrictions
// WARNING: Renamed variable _space_5_minus_Hydroxyindoleacetaldehyde to xxx_space_5_minus_Hydroxyindoleacetaldehyde due to JSim namespace restrictions
// WARNING: Renamed variable _space_5_minus_Methoxytryptamine to xxx_space_5_minus_Methoxytryptamine due to JSim namespace restrictions
// WARNING: Renamed variable _space_5_minus_Hydroxyindoleacetate to xxx_space_5_minus_Hydroxyindoleacetate due to JSim namespace restrictions
// WARNING: Renamed variable _space_3_minus_Hydroxyanthranilate to xxx_space_3_minus_Hydroxyanthranilate due to JSim namespace restrictions
// WARNING: Renamed variable _space_3_minus_Methoxyanthranilate to xxx_space_3_minus_Methoxyanthranilate due to JSim namespace restrictions
// WARNING: Renamed variable _space_8_minus_Methoxykynurenate to xxx_space_8_minus_Methoxykynurenate due to JSim namespace restrictions

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R02912: _space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol <=> _space_5_minus_Methoxytryptamine 
// R02671: _space_3_minus_Hydroxyanthranilate <=> _space_3_minus_Methoxyanthranilate 
// R04903: _space_5_minus_Hydroxyindoleacetaldehyde <=> _space_5_minus_Hydroxyindoleacetate 
// R02678: Indole_minus_3_minus_acetaldehyde <=> Indole_minus_3_minus_acetate 
// R03955: Xanthurenic_space_acid <=> _space_8_minus_Methoxykynurenate 
// R00238: Acetyl_minus_CoA <=> Acetoacetyl_minus_CoA 
// R02908: _space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol <=> _space_5_minus_Hydroxyindoleacetaldehyde 
// R04908: _space_5_minus_Hydroxykynurenamine <=> _space_4_space_6_minus_Dihydroxyquinoline 
// R04907: _space_3_minus_Hydroxykynurenamine <=> _space_4_space_8_minus_Dihydroxyquinoline 
// R02173: Tryptamine <=> Indole_minus_3_minus_acetaldehyde 
// R03664: L_minus_Tryptophan <=> L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_ 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E1_space_4_space_3_space_4 = 0 M;
  real E2_space_3_space_1_space_9 = 0 M;
  real E6_space_1_space_1_space_2 = 0 M;
  real E1_space_2_space_1_space_3 = 0 M;
  real E2_space_1_space_1_space__minus_ = 0 M;
  real xxx_space_4_space_6_minus_Dihydroxyquinoline(time) M;
  real xxx_space_5_minus_Hydroxykynurenamine(time) M;
  real Acetyl_minus_CoA(time) M;
  real L_minus_Tryptophan(time) M;
  real Acetoacetyl_minus_CoA(time) M;
  real L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_(time) M;
  real xxx_space_3_minus_Hydroxykynurenamine(time) M;
  real xxx_space_4_space_8_minus_Dihydroxyquinoline(time) M;
  real xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol(time) M;
  real xxx_space_5_minus_Hydroxyindoleacetaldehyde(time) M;
  real xxx_space_5_minus_Methoxytryptamine(time) M;
  real xxx_space_5_minus_Hydroxyindoleacetate(time) M;
  real Xanthurenic_space_acid(time) M;
  real Indole_minus_3_minus_acetaldehyde(time) M;
  real Tryptamine(time) M;
  real xxx_space_3_minus_Hydroxyanthranilate(time) M;
  real xxx_space_3_minus_Methoxyanthranilate(time) M;
  real xxx_space_8_minus_Methoxykynurenate(time) M;
  real Indole_minus_3_minus_acetate(time) M;
  real R02912(time) katal;
  extern real R02912.kf;
  extern real R02912.kb;
  real R02671(time) katal;
  extern real R02671.kf;
  extern real R02671.kb;
  real R04903(time) katal;
  extern real R04903.kf;
  extern real R04903.kb;
  real R02678(time) katal;
  extern real R02678.kf;
  extern real R02678.kb;
  real R03955(time) katal;
  extern real R03955.kf;
  extern real R03955.kb;
  real R00238(time) katal;
  extern real R00238.kf;
  extern real R00238.kb;
  real R02908(time) katal;
  extern real R02908.kf;
  extern real R02908.kb;
  real R04908(time) katal;
  extern real R04908.kf;
  extern real R04908.kb;
  real R04907(time) katal;
  extern real R04907.kf;
  extern real R04907.kb;
  real R02173(time) katal;
  extern real R02173.kf;
  extern real R02173.kb;
  real R03664(time) katal;
  extern real R03664.kf;
  extern real R03664.kb;

  // equations
  when (time=time.min) xxx_space_4_space_6_minus_Dihydroxyquinoline = 0;
  (xxx_space_4_space_6_minus_Dihydroxyquinoline*uVol):time = R04908;
  when (time=time.min) xxx_space_5_minus_Hydroxykynurenamine = 0;
  (xxx_space_5_minus_Hydroxykynurenamine*uVol):time = -1*R04908;
  when (time=time.min) Acetyl_minus_CoA = 0;
  (Acetyl_minus_CoA*uVol):time = -1*R00238;
  when (time=time.min) L_minus_Tryptophan = 0;
  (L_minus_Tryptophan*uVol):time = -1*R03664;
  when (time=time.min) Acetoacetyl_minus_CoA = 0;
  (Acetoacetyl_minus_CoA*uVol):time = R00238;
  when (time=time.min) L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_ = 0;
  (L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_*uVol):time = R03664;
  when (time=time.min) xxx_space_3_minus_Hydroxykynurenamine = 0;
  (xxx_space_3_minus_Hydroxykynurenamine*uVol):time = -1*R04907;
  when (time=time.min) xxx_space_4_space_8_minus_Dihydroxyquinoline = 0;
  (xxx_space_4_space_8_minus_Dihydroxyquinoline*uVol):time = R04907;
  when (time=time.min) xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol = 0;
  (xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol*uVol):time = -1*R02912 + -1*R02908;
  when (time=time.min) xxx_space_5_minus_Hydroxyindoleacetaldehyde = 0;
  (xxx_space_5_minus_Hydroxyindoleacetaldehyde*uVol):time = -1*R04903 + R02908;
  when (time=time.min) xxx_space_5_minus_Methoxytryptamine = 0;
  (xxx_space_5_minus_Methoxytryptamine*uVol):time = R02912;
  when (time=time.min) xxx_space_5_minus_Hydroxyindoleacetate = 0;
  (xxx_space_5_minus_Hydroxyindoleacetate*uVol):time = R04903;
  when (time=time.min) Xanthurenic_space_acid = 0;
  (Xanthurenic_space_acid*uVol):time = -1*R03955;
  when (time=time.min) Indole_minus_3_minus_acetaldehyde = 0;
  (Indole_minus_3_minus_acetaldehyde*uVol):time = -1*R02678 + R02173;
  when (time=time.min) Tryptamine = 0;
  (Tryptamine*uVol):time = -1*R02173;
  when (time=time.min) xxx_space_3_minus_Hydroxyanthranilate = 0;
  (xxx_space_3_minus_Hydroxyanthranilate*uVol):time = -1*R02671;
  when (time=time.min) xxx_space_3_minus_Methoxyanthranilate = 0;
  (xxx_space_3_minus_Methoxyanthranilate*uVol):time = R02671;
  when (time=time.min) xxx_space_8_minus_Methoxykynurenate = 0;
  (xxx_space_8_minus_Methoxykynurenate*uVol):time = R03955;
  when (time=time.min) Indole_minus_3_minus_acetate = 0;
  (Indole_minus_3_minus_acetate*uVol):time = R02678;
  R02912 = R02912.kf*_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol - R02912.kb*_space_5_minus_Methoxytryptamine;
  R02671 = R02671.kf*_space_3_minus_Hydroxyanthranilate - R02671.kb*_space_3_minus_Methoxyanthranilate;
  R04903 = R04903.kf*_space_5_minus_Hydroxyindoleacetaldehyde - R04903.kb*_space_5_minus_Hydroxyindoleacetate;
  R02678 = R02678.kf*Indole_minus_3_minus_acetaldehyde - R02678.kb*Indole_minus_3_minus_acetate;
  R03955 = R03955.kf*Xanthurenic_space_acid - R03955.kb*_space_8_minus_Methoxykynurenate;
  R00238 = R00238.kf*Acetyl_minus_CoA - R00238.kb*Acetoacetyl_minus_CoA;
  R02908 = R02908.kf*_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol - R02908.kb*_space_5_minus_Hydroxyindoleacetaldehyde;
  R04908 = R04908.kf*_space_5_minus_Hydroxykynurenamine - R04908.kb*_space_4_space_6_minus_Dihydroxyquinoline;
  R04907 = R04907.kf*_space_3_minus_Hydroxykynurenamine - R04907.kb*_space_4_space_8_minus_Dihydroxyquinoline;
  R02173 = R02173.kf*Tryptamine - R02173.kb*Indole_minus_3_minus_acetaldehyde;
  R03664 = R03664.kf*L_minus_Tryptophan - R03664.kb*L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E1_space_4_space_3_space_4.sbmlRole="species";
  E1_space_4_space_3_space_4.sbmlCompartment="uVol";
  E2_space_3_space_1_space_9.sbmlRole="species";
  E2_space_3_space_1_space_9.sbmlCompartment="uVol";
  E6_space_1_space_1_space_2.sbmlRole="species";
  E6_space_1_space_1_space_2.sbmlCompartment="uVol";
  E1_space_2_space_1_space_3.sbmlRole="species";
  E1_space_2_space_1_space_3.sbmlCompartment="uVol";
  E2_space_1_space_1_space__minus_.sbmlRole="species";
  E2_space_1_space_1_space__minus_.sbmlCompartment="uVol";
  xxx_space_4_space_6_minus_Dihydroxyquinoline.sbmlRole="species";
  xxx_space_4_space_6_minus_Dihydroxyquinoline.sbmlName="_space_4_space_6_minus_Dihydroxyquinoline";
  xxx_space_4_space_6_minus_Dihydroxyquinoline.sbmlCompartment="uVol";
  xxx_space_5_minus_Hydroxykynurenamine.sbmlRole="species";
  xxx_space_5_minus_Hydroxykynurenamine.sbmlName="_space_5_minus_Hydroxykynurenamine";
  xxx_space_5_minus_Hydroxykynurenamine.sbmlCompartment="uVol";
  Acetyl_minus_CoA.sbmlRole="species";
  Acetyl_minus_CoA.sbmlCompartment="uVol";
  L_minus_Tryptophan.sbmlRole="species";
  L_minus_Tryptophan.sbmlCompartment="uVol";
  Acetoacetyl_minus_CoA.sbmlRole="species";
  Acetoacetyl_minus_CoA.sbmlCompartment="uVol";
  L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_.sbmlRole="species";
  L_minus_Tryptophanyl_minus_tRNA_space_Trp_space_.sbmlCompartment="uVol";
  xxx_space_3_minus_Hydroxykynurenamine.sbmlRole="species";
  xxx_space_3_minus_Hydroxykynurenamine.sbmlName="_space_3_minus_Hydroxykynurenamine";
  xxx_space_3_minus_Hydroxykynurenamine.sbmlCompartment="uVol";
  xxx_space_4_space_8_minus_Dihydroxyquinoline.sbmlRole="species";
  xxx_space_4_space_8_minus_Dihydroxyquinoline.sbmlName="_space_4_space_8_minus_Dihydroxyquinoline";
  xxx_space_4_space_8_minus_Dihydroxyquinoline.sbmlCompartment="uVol";
  xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol.sbmlRole="species";
  xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol.sbmlName="_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol";
  xxx_space_3_minus__space_2_minus_Aminoethyl_space__minus_1H_minus_indol_minus_5_minus_ol.sbmlCompartment="uVol";
  xxx_space_5_minus_Hydroxyindoleacetaldehyde.sbmlRole="species";
  xxx_space_5_minus_Hydroxyindoleacetaldehyde.sbmlName="_space_5_minus_Hydroxyindoleacetaldehyde";
  xxx_space_5_minus_Hydroxyindoleacetaldehyde.sbmlCompartment="uVol";
  xxx_space_5_minus_Methoxytryptamine.sbmlRole="species";
  xxx_space_5_minus_Methoxytryptamine.sbmlName="_space_5_minus_Methoxytryptamine";
  xxx_space_5_minus_Methoxytryptamine.sbmlCompartment="uVol";
  xxx_space_5_minus_Hydroxyindoleacetate.sbmlRole="species";
  xxx_space_5_minus_Hydroxyindoleacetate.sbmlName="_space_5_minus_Hydroxyindoleacetate";
  xxx_space_5_minus_Hydroxyindoleacetate.sbmlCompartment="uVol";
  Xanthurenic_space_acid.sbmlRole="species";
  Xanthurenic_space_acid.sbmlCompartment="uVol";
  Indole_minus_3_minus_acetaldehyde.sbmlRole="species";
  Indole_minus_3_minus_acetaldehyde.sbmlCompartment="uVol";
  Tryptamine.sbmlRole="species";
  Tryptamine.sbmlCompartment="uVol";
  xxx_space_3_minus_Hydroxyanthranilate.sbmlRole="species";
  xxx_space_3_minus_Hydroxyanthranilate.sbmlName="_space_3_minus_Hydroxyanthranilate";
  xxx_space_3_minus_Hydroxyanthranilate.sbmlCompartment="uVol";
  xxx_space_3_minus_Methoxyanthranilate.sbmlRole="species";
  xxx_space_3_minus_Methoxyanthranilate.sbmlName="_space_3_minus_Methoxyanthranilate";
  xxx_space_3_minus_Methoxyanthranilate.sbmlCompartment="uVol";
  xxx_space_8_minus_Methoxykynurenate.sbmlRole="species";
  xxx_space_8_minus_Methoxykynurenate.sbmlName="_space_8_minus_Methoxykynurenate";
  xxx_space_8_minus_Methoxykynurenate.sbmlCompartment="uVol";
  Indole_minus_3_minus_acetate.sbmlRole="species";
  Indole_minus_3_minus_acetate.sbmlCompartment="uVol";
  R02912.sbmlRole="rate";
  R02912.kf.sbmlRole="rate";
  R02912.kb.sbmlRole="rate";
  R02671.sbmlRole="rate";
  R02671.kf.sbmlRole="rate";
  R02671.kb.sbmlRole="rate";
  R04903.sbmlRole="rate";
  R04903.kf.sbmlRole="rate";
  R04903.kb.sbmlRole="rate";
  R02678.sbmlRole="rate";
  R02678.kf.sbmlRole="rate";
  R02678.kb.sbmlRole="rate";
  R03955.sbmlRole="rate";
  R03955.kf.sbmlRole="rate";
  R03955.kb.sbmlRole="rate";
  R00238.sbmlRole="rate";
  R00238.kf.sbmlRole="rate";
  R00238.kb.sbmlRole="rate";
  R02908.sbmlRole="rate";
  R02908.kf.sbmlRole="rate";
  R02908.kb.sbmlRole="rate";
  R04908.sbmlRole="rate";
  R04908.kf.sbmlRole="rate";
  R04908.kb.sbmlRole="rate";
  R04907.sbmlRole="rate";
  R04907.kf.sbmlRole="rate";
  R04907.kb.sbmlRole="rate";
  R02173.sbmlRole="rate";
  R02173.kf.sbmlRole="rate";
  R02173.kb.sbmlRole="rate";
  R03664.sbmlRole="rate";
  R03664.kf.sbmlRole="rate";
  R03664.kb.sbmlRole="rate";
}