// This model generated automatically from SBML
// WARNING: Renamed variable _beta__minus_D_minus_Fructose to xxx_beta__minus_D_minus_Fructose due to JSim namespace restrictions
// WARNING: Renamed variable _beta__minus_D_minus_Glucose to xxx_beta__minus_D_minus_Glucose due to JSim namespace restrictions
// WARNING: Renamed variable _alpha__minus_D_minus_Glucose to xxx_alpha__minus_D_minus_Glucose due to JSim namespace restrictions
// WARNING: Renamed variable _alpha__minus_D_minus_Glucose_space_6_minus_phosphate to xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate due to JSim namespace restrictions
// WARNING: Renamed variable _beta__minus_D_minus_Fructose_space_6_minus_phosphate to xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate due to JSim namespace restrictions
// WARNING: Renamed variable _beta__minus_D_minus_Glucuronoside to xxx_beta__minus_D_minus_Glucuronoside due to JSim namespace restrictions
// WARNING: Renamed variable _alpha__space_alpha_minus_Trehalose to xxx_alpha__space_alpha_minus_Trehalose due to JSim namespace restrictions

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R02109: Starch => Amylose _alpha__minus_D_minus_Glucose 
// R00028: Maltose <=> _alpha__minus_D_minus_Glucose 
// R01786: _alpha__minus_D_minus_Glucose <=> _alpha__minus_D_minus_Glucose_space_6_minus_phosphate 
// R01788: _alpha__minus_D_minus_Glucose_space_6_minus_phosphate => _alpha__minus_D_minus_Glucose 
// R02108: Starch <=> Dextrin 
// R00286: UDP_minus_glucose <=> UDP_minus_glucuronate 
// R03527: D_minus_Glucoside <=> _alpha__minus_D_minus_Glucose 
// R03920: _beta__minus_D_minus_Fructose => _beta__minus_D_minus_Fructose_space_6_minus_phosphate 
// R02740: _alpha__minus_D_minus_Glucose_space_6_minus_phosphate => _beta__minus_D_minus_Fructose_space_6_minus_phosphate 
// R01719: Isomaltose <=> Isomaltose 
// R00802: Sucrose <=> _alpha__minus_D_minus_Glucose _beta__minus_D_minus_Fructose 
// R02421: ADP_minus_glucose <=> Amylose 
// R05196: D_minus_Glucose <=> Maltose 
// R00010: _alpha__space_alpha_minus_Trehalose <=> D_minus_Glucose 
// R01383: UDP_minus_glucuronate <=> _beta__minus_D_minus_Glucuronoside 
// R00292: UDP_minus_glucose <=> Amylose 
// R01384: UDP_minus_glucuronate <=> UDP_minus_D_minus_xylose 
// R00959: D_minus_Glucose_space_1_minus_phosphate => _alpha__minus_D_minus_Glucose_space_6_minus_phosphate 
// R01478: _beta__minus_D_minus_Glucuronoside <=> D_minus_Glucuronate 
// R01718: Isomaltose <=> _alpha__minus_D_minus_Glucose 
// R01791: Dextrin <=> _alpha__minus_D_minus_Glucose 
// R00026: Cellobiose <=> _beta__minus_D_minus_Glucose 
// R02111: Amylose D_minus_Glucose_space_1_minus_phosphate <=> Starch 
// R02887: Cellulose <=> _beta__minus_D_minus_Glucose 
// R02110: Amylose <=> Starch 
// R00289: D_minus_Glucose_space_1_minus_phosphate <=> UDP_minus_glucose 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E2_space_4_space_1_space_25 = 0 M;
  real E3_space_2_space_1_space_20 = 0 M;
  real E3_space_2_space_1_space_48 = 0 M;
  real E3_space_2_space_1_space_21 = 0 M;
  real E3_space_1_space_3_space_9 = 0 M;
  real E2_space_7_space_1_space_1 = 0 M;
  real E4_space_1_space_1_space_35 = 0 M;
  real E1_space_1_space_1_space_22 = 0 M;
  real E2_space_7_space_7_space_9 = 0 M;
  real E5_space_3_space_1_space_9 = 0 M;
  real E5_space_4_space_2_space_2 = 0 M;
  real E2_space_4_space_1_space_17 = 0 M;
  real E2_space_4_space_1_space_11 = 0 M;
  real E2_space_4_space_1_space_21 = 0 M;
  real E3_space_2_space_1_space_31 = 0 M;
  real E2_space_4_space_1_space_18 = 0 M;
  real E3_space_2_space_1_space_33 = 0 M;
  real E2_space_4_space_1_space_1 = 0 M;
  real E3_space_2_space_1_space_1 = 0 M;
  real E3_space_6_space_1_space__minus_ = 0 M;
  real E3_space_2_space_1_space_28 = 0 M;
  real E3_space_2_space_1_space_10 = 0 M;
  real D_minus_Glucose(time) M;
  real Maltose(time) M;
  real xxx_beta__minus_D_minus_Fructose(time) M;
  real xxx_beta__minus_D_minus_Glucose(time) M;
  real xxx_alpha__minus_D_minus_Glucose(time) M;
  real Cellobiose(time) M;
  real Cellulose(time) M;
  real Sucrose(time) M;
  real D_minus_Glucoside(time) M;
  real UDP_minus_D_minus_xylose(time) M;
  real UDP_minus_glucuronate(time) M;
  real UDP_minus_glucose(time) M;
  real D_minus_Glucose_space_1_minus_phosphate(time) M;
  real xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate(time) M;
  real xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate(time) M;
  real ADP_minus_glucose(time) M;
  real xxx_beta__minus_D_minus_Glucuronoside(time) M;
  real Amylose(time) M;
  real D_minus_Glucuronate(time) M;
  real Starch(time) M;
  real xxx_alpha__space_alpha_minus_Trehalose(time) M;
  real Isomaltose(time) M;
  real Dextrin(time) M;
  real R02109(time) katal;
  extern real R02109.kf;
  extern real R02109.kb;
  real R00028(time) katal;
  extern real R00028.kf;
  extern real R00028.kb;
  real R01786(time) katal;
  extern real R01786.kf;
  extern real R01786.kb;
  real R01788(time) katal;
  extern real R01788.kf;
  extern real R01788.kb;
  real R02108(time) katal;
  extern real R02108.kf;
  extern real R02108.kb;
  real R00286(time) katal;
  extern real R00286.kf;
  extern real R00286.kb;
  real R03527(time) katal;
  extern real R03527.kf;
  extern real R03527.kb;
  real R03920(time) katal;
  extern real R03920.kf;
  extern real R03920.kb;
  real R02740(time) katal;
  extern real R02740.kf;
  extern real R02740.kb;
  real R01719(time) katal;
  extern real R01719.kf;
  extern real R01719.kb;
  real R00802(time) katal;
  extern real R00802.kf;
  extern real R00802.kb;
  real R02421(time) katal;
  extern real R02421.kf;
  extern real R02421.kb;
  real R05196(time) katal;
  extern real R05196.kf;
  extern real R05196.kb;
  real R00010(time) katal;
  extern real R00010.kf;
  extern real R00010.kb;
  real R01383(time) katal;
  extern real R01383.kf;
  extern real R01383.kb;
  real R00292(time) katal;
  extern real R00292.kf;
  extern real R00292.kb;
  real R01384(time) katal;
  extern real R01384.kf;
  extern real R01384.kb;
  real R00959(time) katal;
  extern real R00959.kf;
  extern real R00959.kb;
  real R01478(time) katal;
  extern real R01478.kf;
  extern real R01478.kb;
  real R01718(time) katal;
  extern real R01718.kf;
  extern real R01718.kb;
  real R01791(time) katal;
  extern real R01791.kf;
  extern real R01791.kb;
  real R00026(time) katal;
  extern real R00026.kf;
  extern real R00026.kb;
  real R02111(time) katal;
  extern real R02111.kf;
  extern real R02111.kb;
  real R02887(time) katal;
  extern real R02887.kf;
  extern real R02887.kb;
  real R02110(time) katal;
  extern real R02110.kf;
  extern real R02110.kb;
  real R00289(time) katal;
  extern real R00289.kf;
  extern real R00289.kb;

  // equations
  when (time=time.min) D_minus_Glucose = 0;
  (D_minus_Glucose*uVol):time = -1*R05196 + R00010;
  when (time=time.min) Maltose = 0;
  (Maltose*uVol):time = -1*R00028 + R05196;
  when (time=time.min) xxx_beta__minus_D_minus_Fructose = 0;
  (xxx_beta__minus_D_minus_Fructose*uVol):time = -1*R03920 + R00802;
  when (time=time.min) xxx_beta__minus_D_minus_Glucose = 0;
  (xxx_beta__minus_D_minus_Glucose*uVol):time = R00026 + R02887;
  when (time=time.min) xxx_alpha__minus_D_minus_Glucose = 0;
  (xxx_alpha__minus_D_minus_Glucose*uVol):time = R02109 + R00028 + -1*R01786 + R01788 + R03527 + R00802 + R01718 + R01791;
  when (time=time.min) Cellobiose = 0;
  (Cellobiose*uVol):time = -1*R00026;
  when (time=time.min) Cellulose = 0;
  (Cellulose*uVol):time = -1*R02887;
  when (time=time.min) Sucrose = 0;
  (Sucrose*uVol):time = -1*R00802;
  when (time=time.min) D_minus_Glucoside = 0;
  (D_minus_Glucoside*uVol):time = -1*R03527;
  when (time=time.min) UDP_minus_D_minus_xylose = 0;
  (UDP_minus_D_minus_xylose*uVol):time = R01384;
  when (time=time.min) UDP_minus_glucuronate = 0;
  (UDP_minus_glucuronate*uVol):time = R00286 + -1*R01383 + -1*R01384;
  when (time=time.min) UDP_minus_glucose = 0;
  (UDP_minus_glucose*uVol):time = -1*R00286 + -1*R00292 + R00289;
  when (time=time.min) D_minus_Glucose_space_1_minus_phosphate = 0;
  (D_minus_Glucose_space_1_minus_phosphate*uVol):time = -1*R00959 + -1*R02111 + -1*R00289;
  when (time=time.min) xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate = 0;
  (xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate*uVol):time = R01786 + -1*R01788 + -1*R02740 + R00959;
  when (time=time.min) xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate = 0;
  (xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate*uVol):time = R03920 + R02740;
  when (time=time.min) ADP_minus_glucose = 0;
  (ADP_minus_glucose*uVol):time = -1*R02421;
  when (time=time.min) xxx_beta__minus_D_minus_Glucuronoside = 0;
  (xxx_beta__minus_D_minus_Glucuronoside*uVol):time = R01383 + -1*R01478;
  when (time=time.min) Amylose = 0;
  (Amylose*uVol):time = R02109 + R02421 + R00292 + -1*R02111 + -1*R02110;
  when (time=time.min) D_minus_Glucuronate = 0;
  (D_minus_Glucuronate*uVol):time = R01478;
  when (time=time.min) Starch = 0;
  (Starch*uVol):time = -1*R02109 + -1*R02108 + R02111 + R02110;
  when (time=time.min) xxx_alpha__space_alpha_minus_Trehalose = 0;
  (xxx_alpha__space_alpha_minus_Trehalose*uVol):time = -1*R00010;
  when (time=time.min) Isomaltose = 0;
  (Isomaltose*uVol):time = -1*R01719 + R01719 + -1*R01718;
  when (time=time.min) Dextrin = 0;
  (Dextrin*uVol):time = R02108 + -1*R01791;
  R02109 = R02109.kf*Starch - R02109.kb*Amylose*_alpha__minus_D_minus_Glucose;
  R00028 = R00028.kf*Maltose - R00028.kb*_alpha__minus_D_minus_Glucose;
  R01786 = R01786.kf*_alpha__minus_D_minus_Glucose - R01786.kb*_alpha__minus_D_minus_Glucose_space_6_minus_phosphate;
  R01788 = R01788.kf*_alpha__minus_D_minus_Glucose_space_6_minus_phosphate - R01788.kb*_alpha__minus_D_minus_Glucose;
  R02108 = R02108.kf*Starch - R02108.kb*Dextrin;
  R00286 = R00286.kf*UDP_minus_glucose - R00286.kb*UDP_minus_glucuronate;
  R03527 = R03527.kf*D_minus_Glucoside - R03527.kb*_alpha__minus_D_minus_Glucose;
  R03920 = R03920.kf*_beta__minus_D_minus_Fructose - R03920.kb*_beta__minus_D_minus_Fructose_space_6_minus_phosphate;
  R02740 = R02740.kf*_alpha__minus_D_minus_Glucose_space_6_minus_phosphate - R02740.kb*_beta__minus_D_minus_Fructose_space_6_minus_phosphate;
  R01719 = R01719.kf*Isomaltose - R01719.kb*Isomaltose;
  R00802 = R00802.kf*Sucrose - R00802.kb*_alpha__minus_D_minus_Glucose*_beta__minus_D_minus_Fructose;
  R02421 = R02421.kf*ADP_minus_glucose - R02421.kb*Amylose;
  R05196 = R05196.kf*D_minus_Glucose - R05196.kb*Maltose;
  R00010 = R00010.kf*_alpha__space_alpha_minus_Trehalose - R00010.kb*D_minus_Glucose;
  R01383 = R01383.kf*UDP_minus_glucuronate - R01383.kb*_beta__minus_D_minus_Glucuronoside;
  R00292 = R00292.kf*UDP_minus_glucose - R00292.kb*Amylose;
  R01384 = R01384.kf*UDP_minus_glucuronate - R01384.kb*UDP_minus_D_minus_xylose;
  R00959 = R00959.kf*D_minus_Glucose_space_1_minus_phosphate - R00959.kb*_alpha__minus_D_minus_Glucose_space_6_minus_phosphate;
  R01478 = R01478.kf*_beta__minus_D_minus_Glucuronoside - R01478.kb*D_minus_Glucuronate;
  R01718 = R01718.kf*Isomaltose - R01718.kb*_alpha__minus_D_minus_Glucose;
  R01791 = R01791.kf*Dextrin - R01791.kb*_alpha__minus_D_minus_Glucose;
  R00026 = R00026.kf*Cellobiose - R00026.kb*_beta__minus_D_minus_Glucose;
  R02111 = R02111.kf*Amylose*D_minus_Glucose_space_1_minus_phosphate - R02111.kb*Starch;
  R02887 = R02887.kf*Cellulose - R02887.kb*_beta__minus_D_minus_Glucose;
  R02110 = R02110.kf*Amylose - R02110.kb*Starch;
  R00289 = R00289.kf*D_minus_Glucose_space_1_minus_phosphate - R00289.kb*UDP_minus_glucose;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E2_space_4_space_1_space_25.sbmlRole="species";
  E2_space_4_space_1_space_25.sbmlCompartment="uVol";
  E3_space_2_space_1_space_20.sbmlRole="species";
  E3_space_2_space_1_space_20.sbmlCompartment="uVol";
  E3_space_2_space_1_space_48.sbmlRole="species";
  E3_space_2_space_1_space_48.sbmlCompartment="uVol";
  E3_space_2_space_1_space_21.sbmlRole="species";
  E3_space_2_space_1_space_21.sbmlCompartment="uVol";
  E3_space_1_space_3_space_9.sbmlRole="species";
  E3_space_1_space_3_space_9.sbmlCompartment="uVol";
  E2_space_7_space_1_space_1.sbmlRole="species";
  E2_space_7_space_1_space_1.sbmlCompartment="uVol";
  E4_space_1_space_1_space_35.sbmlRole="species";
  E4_space_1_space_1_space_35.sbmlCompartment="uVol";
  E1_space_1_space_1_space_22.sbmlRole="species";
  E1_space_1_space_1_space_22.sbmlCompartment="uVol";
  E2_space_7_space_7_space_9.sbmlRole="species";
  E2_space_7_space_7_space_9.sbmlCompartment="uVol";
  E5_space_3_space_1_space_9.sbmlRole="species";
  E5_space_3_space_1_space_9.sbmlCompartment="uVol";
  E5_space_4_space_2_space_2.sbmlRole="species";
  E5_space_4_space_2_space_2.sbmlCompartment="uVol";
  E2_space_4_space_1_space_17.sbmlRole="species";
  E2_space_4_space_1_space_17.sbmlCompartment="uVol";
  E2_space_4_space_1_space_11.sbmlRole="species";
  E2_space_4_space_1_space_11.sbmlCompartment="uVol";
  E2_space_4_space_1_space_21.sbmlRole="species";
  E2_space_4_space_1_space_21.sbmlCompartment="uVol";
  E3_space_2_space_1_space_31.sbmlRole="species";
  E3_space_2_space_1_space_31.sbmlCompartment="uVol";
  E2_space_4_space_1_space_18.sbmlRole="species";
  E2_space_4_space_1_space_18.sbmlCompartment="uVol";
  E3_space_2_space_1_space_33.sbmlRole="species";
  E3_space_2_space_1_space_33.sbmlCompartment="uVol";
  E2_space_4_space_1_space_1.sbmlRole="species";
  E2_space_4_space_1_space_1.sbmlCompartment="uVol";
  E3_space_2_space_1_space_1.sbmlRole="species";
  E3_space_2_space_1_space_1.sbmlCompartment="uVol";
  E3_space_6_space_1_space__minus_.sbmlRole="species";
  E3_space_6_space_1_space__minus_.sbmlCompartment="uVol";
  E3_space_2_space_1_space_28.sbmlRole="species";
  E3_space_2_space_1_space_28.sbmlCompartment="uVol";
  E3_space_2_space_1_space_10.sbmlRole="species";
  E3_space_2_space_1_space_10.sbmlCompartment="uVol";
  D_minus_Glucose.sbmlRole="species";
  D_minus_Glucose.sbmlCompartment="uVol";
  Maltose.sbmlRole="species";
  Maltose.sbmlCompartment="uVol";
  xxx_beta__minus_D_minus_Fructose.sbmlRole="species";
  xxx_beta__minus_D_minus_Fructose.sbmlName="_beta__minus_D_minus_Fructose";
  xxx_beta__minus_D_minus_Fructose.sbmlCompartment="uVol";
  xxx_beta__minus_D_minus_Glucose.sbmlRole="species";
  xxx_beta__minus_D_minus_Glucose.sbmlName="_beta__minus_D_minus_Glucose";
  xxx_beta__minus_D_minus_Glucose.sbmlCompartment="uVol";
  xxx_alpha__minus_D_minus_Glucose.sbmlRole="species";
  xxx_alpha__minus_D_minus_Glucose.sbmlName="_alpha__minus_D_minus_Glucose";
  xxx_alpha__minus_D_minus_Glucose.sbmlCompartment="uVol";
  Cellobiose.sbmlRole="species";
  Cellobiose.sbmlCompartment="uVol";
  Cellulose.sbmlRole="species";
  Cellulose.sbmlCompartment="uVol";
  Sucrose.sbmlRole="species";
  Sucrose.sbmlCompartment="uVol";
  D_minus_Glucoside.sbmlRole="species";
  D_minus_Glucoside.sbmlCompartment="uVol";
  UDP_minus_D_minus_xylose.sbmlRole="species";
  UDP_minus_D_minus_xylose.sbmlCompartment="uVol";
  UDP_minus_glucuronate.sbmlRole="species";
  UDP_minus_glucuronate.sbmlCompartment="uVol";
  UDP_minus_glucose.sbmlRole="species";
  UDP_minus_glucose.sbmlCompartment="uVol";
  D_minus_Glucose_space_1_minus_phosphate.sbmlRole="species";
  D_minus_Glucose_space_1_minus_phosphate.sbmlCompartment="uVol";
  xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate.sbmlRole="species";
  xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate.sbmlName="_alpha__minus_D_minus_Glucose_space_6_minus_phosphate";
  xxx_alpha__minus_D_minus_Glucose_space_6_minus_phosphate.sbmlCompartment="uVol";
  xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate.sbmlRole="species";
  xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate.sbmlName="_beta__minus_D_minus_Fructose_space_6_minus_phosphate";
  xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate.sbmlCompartment="uVol";
  ADP_minus_glucose.sbmlRole="species";
  ADP_minus_glucose.sbmlCompartment="uVol";
  xxx_beta__minus_D_minus_Glucuronoside.sbmlRole="species";
  xxx_beta__minus_D_minus_Glucuronoside.sbmlName="_beta__minus_D_minus_Glucuronoside";
  xxx_beta__minus_D_minus_Glucuronoside.sbmlCompartment="uVol";
  Amylose.sbmlRole="species";
  Amylose.sbmlCompartment="uVol";
  D_minus_Glucuronate.sbmlRole="species";
  D_minus_Glucuronate.sbmlCompartment="uVol";
  Starch.sbmlRole="species";
  Starch.sbmlCompartment="uVol";
  xxx_alpha__space_alpha_minus_Trehalose.sbmlRole="species";
  xxx_alpha__space_alpha_minus_Trehalose.sbmlName="_alpha__space_alpha_minus_Trehalose";
  xxx_alpha__space_alpha_minus_Trehalose.sbmlCompartment="uVol";
  Isomaltose.sbmlRole="species";
  Isomaltose.sbmlCompartment="uVol";
  Dextrin.sbmlRole="species";
  Dextrin.sbmlCompartment="uVol";
  R02109.sbmlRole="rate";
  R02109.kf.sbmlRole="rate";
  R02109.kb.sbmlRole="rate";
  R00028.sbmlRole="rate";
  R00028.kf.sbmlRole="rate";
  R00028.kb.sbmlRole="rate";
  R01786.sbmlRole="rate";
  R01786.kf.sbmlRole="rate";
  R01786.kb.sbmlRole="rate";
  R01788.sbmlRole="rate";
  R01788.kf.sbmlRole="rate";
  R01788.kb.sbmlRole="rate";
  R02108.sbmlRole="rate";
  R02108.kf.sbmlRole="rate";
  R02108.kb.sbmlRole="rate";
  R00286.sbmlRole="rate";
  R00286.kf.sbmlRole="rate";
  R00286.kb.sbmlRole="rate";
  R03527.sbmlRole="rate";
  R03527.kf.sbmlRole="rate";
  R03527.kb.sbmlRole="rate";
  R03920.sbmlRole="rate";
  R03920.kf.sbmlRole="rate";
  R03920.kb.sbmlRole="rate";
  R02740.sbmlRole="rate";
  R02740.kf.sbmlRole="rate";
  R02740.kb.sbmlRole="rate";
  R01719.sbmlRole="rate";
  R01719.kf.sbmlRole="rate";
  R01719.kb.sbmlRole="rate";
  R00802.sbmlRole="rate";
  R00802.kf.sbmlRole="rate";
  R00802.kb.sbmlRole="rate";
  R02421.sbmlRole="rate";
  R02421.kf.sbmlRole="rate";
  R02421.kb.sbmlRole="rate";
  R05196.sbmlRole="rate";
  R05196.kf.sbmlRole="rate";
  R05196.kb.sbmlRole="rate";
  R00010.sbmlRole="rate";
  R00010.kf.sbmlRole="rate";
  R00010.kb.sbmlRole="rate";
  R01383.sbmlRole="rate";
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}