// This model generated automatically from SBML
// WARNING: Renamed variable _space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate to xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate due to JSim namespace restrictions
// WARNING: Renamed variable _space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate to xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate due to JSim namespace restrictions
// WARNING: Renamed variable _space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone to xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone due to JSim namespace restrictions

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R02175: _space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone <=> Ubiquinone 
// R04711: _space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate <=> _space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate 
// R02166: Ubiquinone => Ubiquinol 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E2_space_1_space_1_space_114 = 0 M;
  real E1_space_6_space_5_space_3 = 0 M;
  real xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate(time) M;
  real xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate(time) M;
  real xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone(time) M;
  real Ubiquinol(time) M;
  real Ubiquinone(time) M;
  real R02175(time) katal;
  extern real R02175.kf;
  extern real R02175.kb;
  real R04711(time) katal;
  extern real R04711.kf;
  extern real R04711.kb;
  real R02166(time) katal;
  extern real R02166.kf;
  extern real R02166.kb;

  // equations
  when (time=time.min) xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate = 0;
  (xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate*uVol):time = -1*R04711;
  when (time=time.min) xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate = 0;
  (xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate*uVol):time = R04711;
  when (time=time.min) xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone = 0;
  (xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone*uVol):time = -1*R02175;
  when (time=time.min) Ubiquinol = 0;
  (Ubiquinol*uVol):time = R02166;
  when (time=time.min) Ubiquinone = 0;
  (Ubiquinone*uVol):time = R02175 + -1*R02166;
  R02175 = R02175.kf*_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone - R02175.kb*Ubiquinone;
  R04711 = R04711.kf*_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate - R04711.kb*_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate;
  R02166 = R02166.kf*Ubiquinone - R02166.kb*Ubiquinol;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E2_space_1_space_1_space_114.sbmlRole="species";
  E2_space_1_space_1_space_114.sbmlCompartment="uVol";
  E1_space_6_space_5_space_3.sbmlRole="species";
  E1_space_6_space_5_space_3.sbmlCompartment="uVol";
  xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate.sbmlRole="species";
  xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate.sbmlName="_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate";
  xxx_space_3_minus_Hexaprenyl_minus_4_space_5_minus_dihydroxybenzoate.sbmlCompartment="uVol";
  xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate.sbmlRole="species";
  xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate.sbmlName="_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate";
  xxx_space_3_minus_Hexaprenyl_minus_4_minus_hydroxy_minus_5_minus_methoxybenzoate.sbmlCompartment="uVol";
  xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone.sbmlRole="species";
  xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone.sbmlName="_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone";
  xxx_space_2_minus_Hexaprenyl_minus_3_minus_methyl_minus_5_minus_hydroxy_minus_6_minus_methoxy_minus_1_space_4_minus_benzoquinone.sbmlCompartment="uVol";
  Ubiquinol.sbmlRole="species";
  Ubiquinol.sbmlCompartment="uVol";
  Ubiquinone.sbmlRole="species";
  Ubiquinone.sbmlCompartment="uVol";
  R02175.sbmlRole="rate";
  R02175.kf.sbmlRole="rate";
  R02175.kb.sbmlRole="rate";
  R04711.sbmlRole="rate";
  R04711.kf.sbmlRole="rate";
  R04711.kb.sbmlRole="rate";
  R02166.sbmlRole="rate";
  R02166.kf.sbmlRole="rate";
  R02166.kb.sbmlRole="rate";
}