// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R00260: L_minus_Glutamate => D_minus_Glutamate 
// R02783: UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine D_minus_Glutamate <=> UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate 
// R03193: UDP_minus_N_minus_acetylmuramate <=> UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E5_space_1_space_1_space_3 = 0 M;
  real E6_space_3_space_2_space_8 = 0 M;
  real E6_space_3_space_2_space_9 = 0 M;
  real L_minus_Glutamate(time) M;
  real D_minus_Glutamate(time) M;
  real UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine(time) M;
  real UDP_minus_N_minus_acetylmuramate(time) M;
  real UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate(time) M;
  real R00260(time) katal;
  extern real R00260.kf;
  extern real R00260.kb;
  real R02783(time) katal;
  extern real R02783.kf;
  extern real R02783.kb;
  real R03193(time) katal;
  extern real R03193.kf;
  extern real R03193.kb;

  // equations
  when (time=time.min) L_minus_Glutamate = 0;
  (L_minus_Glutamate*uVol):time = -1*R00260;
  when (time=time.min) D_minus_Glutamate = 0;
  (D_minus_Glutamate*uVol):time = R00260 + -1*R02783;
  when (time=time.min) UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine = 0;
  (UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine*uVol):time = -1*R02783 + R03193;
  when (time=time.min) UDP_minus_N_minus_acetylmuramate = 0;
  (UDP_minus_N_minus_acetylmuramate*uVol):time = -1*R03193;
  when (time=time.min) UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate = 0;
  (UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate*uVol):time = R02783;
  R00260 = R00260.kf*L_minus_Glutamate - R00260.kb*D_minus_Glutamate;
  R02783 = R02783.kf*UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine*D_minus_Glutamate - R02783.kb*UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate;
  R03193 = R03193.kf*UDP_minus_N_minus_acetylmuramate - R03193.kb*UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E5_space_1_space_1_space_3.sbmlRole="species";
  E5_space_1_space_1_space_3.sbmlCompartment="uVol";
  E6_space_3_space_2_space_8.sbmlRole="species";
  E6_space_3_space_2_space_8.sbmlCompartment="uVol";
  E6_space_3_space_2_space_9.sbmlRole="species";
  E6_space_3_space_2_space_9.sbmlCompartment="uVol";
  L_minus_Glutamate.sbmlRole="species";
  L_minus_Glutamate.sbmlCompartment="uVol";
  D_minus_Glutamate.sbmlRole="species";
  D_minus_Glutamate.sbmlCompartment="uVol";
  UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine.sbmlRole="species";
  UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanine.sbmlCompartment="uVol";
  UDP_minus_N_minus_acetylmuramate.sbmlRole="species";
  UDP_minus_N_minus_acetylmuramate.sbmlCompartment="uVol";
  UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate.sbmlRole="species";
  UDP_minus_N_minus_acetylmuramoyl_minus_L_minus_alanyl_minus_D_minus_glutamate.sbmlCompartment="uVol";
  R00260.sbmlRole="rate";
  R00260.kf.sbmlRole="rate";
  R00260.kb.sbmlRole="rate";
  R02783.sbmlRole="rate";
  R02783.kf.sbmlRole="rate";
  R02783.kb.sbmlRole="rate";
  R03193.sbmlRole="rate";
  R03193.kf.sbmlRole="rate";
  R03193.kb.sbmlRole="rate";
}