// This model generated automatically from SBML

// unit definitions
import nsrunit;
unit conversion off;

// SBML property definitions
property sbmlRole=string;
property sbmlName=string;
property sbmlCompartment=string;

// SBML reactions
// R01078: Dethiobiotin <=> Biotin 
// R01074: Biotin <=> Biotinyl_minus_5_space__minus_AMP 
// R04869: Holo_minus__space_carboxylase_space_ <=> N6_minus_D_minus_Biotinyl_minus_L_minus_lysine 
// R05145: Biotinyl_minus_5_space__minus_AMP <=> Holo_minus__space_carboxylase_space_ 

math main {
  realDomain time second;
  time.min=0;
  extern time.max;
  extern time.delta;

  // variable definitions
  real default = 1 L;
  real uVol = 1 L;
  real E6_space_3_space_4_space_15 = 0 M;
  real E2_space_8_space_1_space_6 = 0 M;
  real E3_space_4_space__minus__space__minus_ = 0 M;
  real Biotinyl_minus_5_space__minus_AMP(time) M;
  real Dethiobiotin(time) M;
  real Biotin(time) M;
  real Holo_minus__space_carboxylase_space_(time) M;
  real N6_minus_D_minus_Biotinyl_minus_L_minus_lysine(time) M;
  real R01078(time) katal;
  extern real R01078.kf;
  extern real R01078.kb;
  real R01074(time) katal;
  extern real R01074.kf;
  extern real R01074.kb;
  real R04869(time) katal;
  extern real R04869.kf;
  extern real R04869.kb;
  real R05145(time) katal;
  extern real R05145.kf;
  extern real R05145.kb;

  // equations
  when (time=time.min) Biotinyl_minus_5_space__minus_AMP = 0;
  (Biotinyl_minus_5_space__minus_AMP*uVol):time = R01074 + -1*R05145;
  when (time=time.min) Dethiobiotin = 0;
  (Dethiobiotin*uVol):time = -1*R01078;
  when (time=time.min) Biotin = 0;
  (Biotin*uVol):time = R01078 + -1*R01074;
  when (time=time.min) Holo_minus__space_carboxylase_space_ = 0;
  (Holo_minus__space_carboxylase_space_*uVol):time = -1*R04869 + R05145;
  when (time=time.min) N6_minus_D_minus_Biotinyl_minus_L_minus_lysine = 0;
  (N6_minus_D_minus_Biotinyl_minus_L_minus_lysine*uVol):time = R04869;
  R01078 = R01078.kf*Dethiobiotin - R01078.kb*Biotin;
  R01074 = R01074.kf*Biotin - R01074.kb*Biotinyl_minus_5_space__minus_AMP;
  R04869 = R04869.kf*Holo_minus__space_carboxylase_space_ - R04869.kb*N6_minus_D_minus_Biotinyl_minus_L_minus_lysine;
  R05145 = R05145.kf*Biotinyl_minus_5_space__minus_AMP - R05145.kb*Holo_minus__space_carboxylase_space_;

  // variable properties
  default.sbmlRole="compartment";
  uVol.sbmlRole="compartment";
  E6_space_3_space_4_space_15.sbmlRole="species";
  E6_space_3_space_4_space_15.sbmlCompartment="uVol";
  E2_space_8_space_1_space_6.sbmlRole="species";
  E2_space_8_space_1_space_6.sbmlCompartment="uVol";
  E3_space_4_space__minus__space__minus_.sbmlRole="species";
  E3_space_4_space__minus__space__minus_.sbmlCompartment="uVol";
  Biotinyl_minus_5_space__minus_AMP.sbmlRole="species";
  Biotinyl_minus_5_space__minus_AMP.sbmlCompartment="uVol";
  Dethiobiotin.sbmlRole="species";
  Dethiobiotin.sbmlCompartment="uVol";
  Biotin.sbmlRole="species";
  Biotin.sbmlCompartment="uVol";
  Holo_minus__space_carboxylase_space_.sbmlRole="species";
  Holo_minus__space_carboxylase_space_.sbmlCompartment="uVol";
  N6_minus_D_minus_Biotinyl_minus_L_minus_lysine.sbmlRole="species";
  N6_minus_D_minus_Biotinyl_minus_L_minus_lysine.sbmlCompartment="uVol";
  R01078.sbmlRole="rate";
  R01078.kf.sbmlRole="rate";
  R01078.kb.sbmlRole="rate";
  R01074.sbmlRole="rate";
  R01074.kf.sbmlRole="rate";
  R01074.kb.sbmlRole="rate";
  R04869.sbmlRole="rate";
  R04869.kf.sbmlRole="rate";
  R04869.kb.sbmlRole="rate";
  R05145.sbmlRole="rate";
  R05145.kf.sbmlRole="rate";
  R05145.kb.sbmlRole="rate";
}