// This model generated automatically from SBML // WARNING: Renamed variable _space_1_space_4_minus__beta__minus_D_minus_Mannan to xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan due to JSim namespace restrictions // WARNING: Renamed variable _beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate to xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate due to JSim namespace restrictions // WARNING: Renamed variable _space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal to xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal due to JSim namespace restrictions // WARNING: Renamed variable _beta__minus_D_minus_Fructose_space_6_minus_phosphate to xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate due to JSim namespace restrictions // unit definitions import nsrunit; unit conversion off; // SBML property definitions property sbmlRole=string; property sbmlName=string; property sbmlCompartment=string; // SBML reactions // R01070: _beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate => _space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal // R04780: _beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate <=> _beta__minus_D_minus_Fructose_space_6_minus_phosphate // R00887: GDP_minus_mannose <=> Mannan // R01015: _space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal => Glycerone_space_phosphate // R00890: GDP_minus_mannose <=> _space_1_space_4_minus__beta__minus_D_minus_Mannan // R02568: D_minus_Fructose_space_1_minus_phosphate => D_minus_Glyceraldehyde math main { realDomain time second; time.min=0; extern time.max; extern time.delta; // variable definitions real default = 1 L; real uVol = 1 L; real E2_space_4_space_1_space__minus_ = 0 M; real E5_space_3_space_1_space_1 = 0 M; real E4_space_1_space_2_space_13 = 0 M; real E3_space_1_space_3_space_11 = 0 M; real xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan(time) M; real Glycerone_space_phosphate(time) M; real D_minus_Glyceraldehyde(time) M; real Mannan(time) M; real GDP_minus_mannose(time) M; real D_minus_Fructose_space_1_minus_phosphate(time) M; real xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate(time) M; real xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal(time) M; real xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate(time) M; real R01070(time) katal; extern real R01070.kf; extern real R01070.kb; real R04780(time) katal; extern real R04780.kf; extern real R04780.kb; real R00887(time) katal; extern real R00887.kf; extern real R00887.kb; real R01015(time) katal; extern real R01015.kf; extern real R01015.kb; real R00890(time) katal; extern real R00890.kf; extern real R00890.kb; real R02568(time) katal; extern real R02568.kf; extern real R02568.kb; // equations when (time=time.min) xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan = 0; (xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan*uVol):time = R00890; when (time=time.min) Glycerone_space_phosphate = 0; (Glycerone_space_phosphate*uVol):time = R01015; when (time=time.min) D_minus_Glyceraldehyde = 0; (D_minus_Glyceraldehyde*uVol):time = R02568; when (time=time.min) Mannan = 0; (Mannan*uVol):time = R00887; when (time=time.min) GDP_minus_mannose = 0; (GDP_minus_mannose*uVol):time = -1*R00887 + -1*R00890; when (time=time.min) D_minus_Fructose_space_1_minus_phosphate = 0; (D_minus_Fructose_space_1_minus_phosphate*uVol):time = -1*R02568; when (time=time.min) xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate = 0; (xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate*uVol):time = -1*R01070 + -1*R04780; when (time=time.min) xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal = 0; (xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal*uVol):time = R01070 + -1*R01015; when (time=time.min) xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate = 0; (xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate*uVol):time = R04780; R01070 = R01070.kf*_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate - R01070.kb*_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal; R04780 = R04780.kf*_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate - R04780.kb*_beta__minus_D_minus_Fructose_space_6_minus_phosphate; R00887 = R00887.kf*GDP_minus_mannose - R00887.kb*Mannan; R01015 = R01015.kf*_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal - R01015.kb*Glycerone_space_phosphate; R00890 = R00890.kf*GDP_minus_mannose - R00890.kb*_space_1_space_4_minus__beta__minus_D_minus_Mannan; R02568 = R02568.kf*D_minus_Fructose_space_1_minus_phosphate - R02568.kb*D_minus_Glyceraldehyde; // variable properties default.sbmlRole="compartment"; uVol.sbmlRole="compartment"; E2_space_4_space_1_space__minus_.sbmlRole="species"; E2_space_4_space_1_space__minus_.sbmlCompartment="uVol"; E5_space_3_space_1_space_1.sbmlRole="species"; E5_space_3_space_1_space_1.sbmlCompartment="uVol"; E4_space_1_space_2_space_13.sbmlRole="species"; E4_space_1_space_2_space_13.sbmlCompartment="uVol"; E3_space_1_space_3_space_11.sbmlRole="species"; E3_space_1_space_3_space_11.sbmlCompartment="uVol"; xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan.sbmlRole="species"; xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan.sbmlName="_space_1_space_4_minus__beta__minus_D_minus_Mannan"; xxx_space_1_space_4_minus__beta__minus_D_minus_Mannan.sbmlCompartment="uVol"; Glycerone_space_phosphate.sbmlRole="species"; Glycerone_space_phosphate.sbmlCompartment="uVol"; D_minus_Glyceraldehyde.sbmlRole="species"; D_minus_Glyceraldehyde.sbmlCompartment="uVol"; Mannan.sbmlRole="species"; Mannan.sbmlCompartment="uVol"; GDP_minus_mannose.sbmlRole="species"; GDP_minus_mannose.sbmlCompartment="uVol"; D_minus_Fructose_space_1_minus_phosphate.sbmlRole="species"; D_minus_Fructose_space_1_minus_phosphate.sbmlCompartment="uVol"; xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlRole="species"; xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlName="_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate"; xxx_beta__minus_D_minus_Fructose_space_1_space_6_minus_bisphosphate.sbmlCompartment="uVol"; xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal.sbmlRole="species"; xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal.sbmlName="_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal"; xxx_space_2R_space__minus_2_minus_Hydroxy_minus_3_minus__space_phosphonooxy_space__minus_propanal.sbmlCompartment="uVol"; xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate.sbmlRole="species"; xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate.sbmlName="_beta__minus_D_minus_Fructose_space_6_minus_phosphate"; xxx_beta__minus_D_minus_Fructose_space_6_minus_phosphate.sbmlCompartment="uVol"; R01070.sbmlRole="rate"; R01070.kf.sbmlRole="rate"; R01070.kb.sbmlRole="rate"; R04780.sbmlRole="rate"; R04780.kf.sbmlRole="rate"; R04780.kb.sbmlRole="rate"; R00887.sbmlRole="rate"; R00887.kf.sbmlRole="rate"; R00887.kb.sbmlRole="rate"; R01015.sbmlRole="rate"; R01015.kf.sbmlRole="rate"; R01015.kb.sbmlRole="rate"; R00890.sbmlRole="rate"; R00890.kf.sbmlRole="rate"; R00890.kb.sbmlRole="rate"; R02568.sbmlRole="rate"; R02568.kf.sbmlRole="rate"; R02568.kb.sbmlRole="rate"; }