Kegg pathway models for JSim
Organism ang: Aspergillus niger
to run JSim applets. See
JSim Kegg models page
for comlete list of Kegg models.
| Kegg link | Pathway | SBML | MML | Download |
Applet |
|---|
| ang00010 |
Glycolysis / Gluconeogenesis |
SBML |
MML |
|
|
| ang00020 |
Citrate cycle (TCA cycle) |
SBML |
MML |
|
|
| ang00030 |
Pentose phosphate pathway |
SBML |
MML |
|
|
| ang00031 |
(Undocumented) |
SBML |
MML |
|
|
| ang00040 |
Pentose and glucuronate interconversions |
SBML |
MML |
|
|
| ang00051 |
Fructose and mannose metabolism |
SBML |
MML |
|
|
| ang00052 |
Galactose metabolism |
SBML |
MML |
|
|
| ang00053 |
Ascorbate and aldarate metabolism |
SBML |
MML |
|
|
| ang00061 |
Fatty acid biosynthesis |
SBML |
MML |
|
|
| ang00062 |
Fatty acid elongation in mitochondria |
SBML |
MML |
|
|
| ang00071 |
Fatty acid metabolism |
SBML |
MML |
|
|
| ang00072 |
Synthesis and degradation of ketone bodies |
SBML |
MML |
|
|
| ang00100 |
(Undocumented) |
SBML |
MML |
|
|
| ang00120 |
(Undocumented) |
SBML |
MML |
|
|
| ang00130 |
Ubiquinone and other terpenoid-quinone biosynthesis |
SBML |
MML |
|
|
| ang00140 |
(Undocumented) |
SBML |
MML |
|
|
| ang00150 |
Androgen and estrogen metabolism |
SBML |
MML |
|
|
| ang00220 |
(Undocumented) |
SBML |
MML |
|
|
| ang00230 |
Purine metabolism |
SBML |
MML |
|
|
| ang00240 |
Pyrimidine metabolism |
SBML |
MML |
|
|
| ang00251 |
(Undocumented) |
SBML |
MML |
|
|
| ang00252 |
(Undocumented) |
SBML |
MML |
|
|
| ang00260 |
Glycine, serine and threonine metabolism |
SBML |
MML |
|
|
| ang00271 |
(Undocumented) |
SBML |
MML |
|
|
| ang00272 |
(Undocumented) |
SBML |
MML |
|
|
| ang00280 |
Valine, leucine and isoleucine degradation |
SBML |
MML |
|
|
| ang00281 |
Geraniol degradation |
SBML |
MML |
|
|
| ang00290 |
Valine, leucine and isoleucine biosynthesis |
SBML |
MML |
|
|
| ang00300 |
Lysine biosynthesis |
SBML |
MML |
|
|
| ang00310 |
Lysine degradation |
SBML |
MML |
|
|
| ang00330 |
Arginine and proline metabolism |
SBML |
MML |
|
|
| ang00340 |
Histidine metabolism |
SBML |
MML |
|
|
| ang00350 |
Tyrosine metabolism |
SBML |
MML |
|
|
| ang00351 |
1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation |
SBML |
MML |
|
|
| ang00360 |
Phenylalanine metabolism |
SBML |
MML |
|
|
| ang00361 |
gamma-Hexachlorocyclohexane degradation |
SBML |
MML |
|
|
| ang00362 |
(Undocumented) |
SBML |
MML |
|
|
| ang00363 |
Bisphenol A degradation |
SBML |
MML |
|
|
| ang00364 |
Fluorobenzoate degradation |
SBML |
MML |
|
|
| ang00380 |
Tryptophan metabolism |
SBML |
MML |
|
|
| ang00400 |
Phenylalanine, tyrosine and tryptophan biosynthesis |
SBML |
MML |
|
|
| ang00401 |
Novobiocin biosynthesis |
SBML |
MML |
|
|
| ang00410 |
beta-Alanine metabolism |
SBML |
MML |
|
|
| ang00430 |
Taurine and hypotaurine metabolism |
SBML |
MML |
|
|
| ang00440 |
Phosphonate and phosphinate metabolism |
SBML |
MML |
|
|
| ang00450 |
Selenoamino acid metabolism |
SBML |
MML |
|
|
| ang00460 |
(Undocumented) |
SBML |
MML |
|
|
| ang00472 |
D-Arginine and D-ornithine metabolism |
SBML |
MML |
|
|
| ang00480 |
Glutathione metabolism |
SBML |
MML |
|
|
| ang00500 |
Starch and sucrose metabolism |
SBML |
MML |
|
|
| ang00510 |
(Undocumented) |
SBML |
MML |
|
|
| ang00520 |
Amino sugar and nucleotide sugar metabolism |
SBML |
MML |
|
|
| ang00521 |
Streptomycin biosynthesis |
SBML |
MML |
|
|
| ang00523 |
Polyketide sugar unit biosynthesis |
SBML |
MML |
|
|
| ang00530 |
(Undocumented) |
SBML |
MML |
|
|
| ang00550 |
Peptidoglycan biosynthesis |
SBML |
MML |
|
|
| ang00561 |
Glycerolipid metabolism |
SBML |
MML |
|
|
| ang00562 |
Inositol phosphate metabolism |
SBML |
MML |
|
|
| ang00564 |
Glycerophospholipid metabolism |
SBML |
MML |
|
|
| ang00565 |
Ether lipid metabolism |
SBML |
MML |
|
|
| ang00590 |
Arachidonic acid metabolism |
SBML |
MML |
|
|
| ang00591 |
Linoleic acid metabolism |
SBML |
MML |
|
|
| ang00592 |
alpha-Linolenic acid metabolism |
SBML |
MML |
|
|
| ang00600 |
Sphingolipid metabolism |
SBML |
MML |
|
|
| ang00620 |
Pyruvate metabolism |
SBML |
MML |
|
|
| ang00622 |
Toluene and xylene degradation |
SBML |
MML |
|
|
| ang00623 |
2,4-Dichlorobenzoate degradation |
SBML |
MML |
|
|
| ang00624 |
1- and 2-Methylnaphthalene degradation |
SBML |
MML |
|
|
| ang00626 |
Naphthalene and anthracene degradation |
SBML |
MML |
|
|
| ang00627 |
1,4-Dichlorobenzene degradation |
SBML |
MML |
|
|
| ang00628 |
Fluorene degradation |
SBML |
MML |
|
|
| ang00630 |
Glyoxylate and dicarboxylate metabolism |
SBML |
MML |
|
|
| ang00631 |
1,2-Dichloroethane degradation |
SBML |
MML |
|
|
| ang00632 |
(Undocumented) |
SBML |
MML |
|
|
| ang00640 |
Propanoate metabolism |
SBML |
MML |
|
|
| ang00641 |
3-Chloroacrylic acid degradation |
SBML |
MML |
|
|
| ang00642 |
Ethylbenzene degradation |
SBML |
MML |
|
|
| ang00643 |
Styrene degradation |
SBML |
MML |
|
|
| ang00650 |
Butanoate metabolism |
SBML |
MML |
|
|
| ang00660 |
C5-Branched dibasic acid metabolism |
SBML |
MML |
|
|
| ang00670 |
One carbon pool by folate |
SBML |
MML |
|
|
| ang00680 |
Methane metabolism |
SBML |
MML |
|
|
| ang00710 |
(Undocumented) |
SBML |
MML |
|
|
| ang00720 |
(Undocumented) |
SBML |
MML |
|
|
| ang00730 |
Thiamine metabolism |
SBML |
MML |
|
|
| ang00740 |
Riboflavin metabolism |
SBML |
MML |
|
|
| ang00750 |
Vitamin B6 metabolism |
SBML |
MML |
|
|
| ang00760 |
Nicotinate and nicotinamide metabolism |
SBML |
MML |
|
|
| ang00770 |
Pantothenate and CoA biosynthesis |
SBML |
MML |
|
|
| ang00780 |
Biotin metabolism |
SBML |
MML |
|
|
| ang00790 |
Folate biosynthesis |
SBML |
MML |
|
|
| ang00791 |
Atrazine degradation |
SBML |
MML |
|
|
| ang00860 |
Porphyrin and chlorophyll metabolism |
SBML |
MML |
|
|
| ang00900 |
Terpenoid backbone biosynthesis |
SBML |
MML |
|
|
| ang00903 |
(Undocumented) |
SBML |
MML |
|
|
| ang00910 |
Nitrogen metabolism |
SBML |
MML |
|
|
| ang00920 |
Sulfur metabolism |
SBML |
MML |
|
|
| ang00930 |
Caprolactam degradation |
SBML |
MML |
|
|
| ang00940 |
(Undocumented) |
SBML |
MML |
|
|
| ang00941 |
(Undocumented) |
SBML |
MML |
|
|
| ang00944 |
(Undocumented) |
SBML |
MML |
|
|
| ang00950 |
(Undocumented) |
SBML |
MML |
|
|
| ang00960 |
(Undocumented) |
SBML |
MML |
|
|
| ang00970 |
Aminoacyl-tRNA biosynthesis |
SBML |
MML |
|
|
| ang00980 |
Metabolism of xenobiotics by cytochrome P450 |
SBML |
MML |
|
|
| ang00982 |
(Undocumented) |
SBML |
MML |
|
|
| ang00983 |
(Undocumented) |
SBML |
MML |
|
|
Model development and archiving support at
physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration,
JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ,
4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation,
8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer
Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior
support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass
Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973
JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.
