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Kegg pathway models for JSim

Organism aav: Acidovorax avenae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
aav00010 Glycolysis / Gluconeogenesis SBML MML
aav00020 Citrate cycle (TCA cycle) SBML MML
aav00030 Pentose phosphate pathway SBML MML
aav00031 (Undocumented) SBML MML
aav00040 Pentose and glucuronate interconversions SBML MML
aav00051 Fructose and mannose metabolism SBML MML
aav00052 Galactose metabolism SBML MML
aav00053 Ascorbate and aldarate metabolism SBML MML
aav00061 Fatty acid biosynthesis SBML MML
aav00062 Fatty acid elongation in mitochondria SBML MML
aav00071 Fatty acid metabolism SBML MML
aav00072 Synthesis and degradation of ketone bodies SBML MML
aav00100 (Undocumented) SBML MML
aav00120 (Undocumented) SBML MML
aav00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
aav00220 (Undocumented) SBML MML
aav00230 Purine metabolism SBML MML
aav00240 Pyrimidine metabolism SBML MML
aav00251 (Undocumented) SBML MML
aav00252 (Undocumented) SBML MML
aav00260 Glycine, serine and threonine metabolism SBML MML
aav00271 (Undocumented) SBML MML
aav00272 (Undocumented) SBML MML
aav00280 Valine, leucine and isoleucine degradation SBML MML
aav00281 Geraniol degradation SBML MML
aav00290 Valine, leucine and isoleucine biosynthesis SBML MML
aav00300 Lysine biosynthesis SBML MML
aav00310 Lysine degradation SBML MML
aav00330 Arginine and proline metabolism SBML MML
aav00340 Histidine metabolism SBML MML
aav00350 Tyrosine metabolism SBML MML
aav00360 Phenylalanine metabolism SBML MML
aav00361 gamma-Hexachlorocyclohexane degradation SBML MML
aav00362 (Undocumented) SBML MML
aav00364 Fluorobenzoate degradation SBML MML
aav00380 Tryptophan metabolism SBML MML
aav00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
aav00401 Novobiocin biosynthesis SBML MML
aav00410 beta-Alanine metabolism SBML MML
aav00430 Taurine and hypotaurine metabolism SBML MML
aav00440 Phosphonate and phosphinate metabolism SBML MML
aav00450 Selenoamino acid metabolism SBML MML
aav00460 (Undocumented) SBML MML
aav00471 D-Glutamine and D-glutamate metabolism SBML MML
aav00473 D-Alanine metabolism SBML MML
aav00480 Glutathione metabolism SBML MML
aav00500 Starch and sucrose metabolism SBML MML
aav00520 Amino sugar and nucleotide sugar metabolism SBML MML
aav00521 Streptomycin biosynthesis SBML MML
aav00523 Polyketide sugar unit biosynthesis SBML MML
aav00530 (Undocumented) SBML MML
aav00540 Lipopolysaccharide biosynthesis SBML MML
aav00550 Peptidoglycan biosynthesis SBML MML
aav00561 Glycerolipid metabolism SBML MML
aav00562 Inositol phosphate metabolism SBML MML
aav00564 Glycerophospholipid metabolism SBML MML
aav00565 Ether lipid metabolism SBML MML
aav00590 Arachidonic acid metabolism SBML MML
aav00592 alpha-Linolenic acid metabolism SBML MML
aav00620 Pyruvate metabolism SBML MML
aav00624 1- and 2-Methylnaphthalene degradation SBML MML
aav00626 Naphthalene and anthracene degradation SBML MML
aav00627 1,4-Dichlorobenzene degradation SBML MML
aav00628 Fluorene degradation SBML MML
aav00630 Glyoxylate and dicarboxylate metabolism SBML MML
aav00631 1,2-Dichloroethane degradation SBML MML
aav00632 (Undocumented) SBML MML
aav00640 Propanoate metabolism SBML MML
aav00641 3-Chloroacrylic acid degradation SBML MML
aav00643 Styrene degradation SBML MML
aav00650 Butanoate metabolism SBML MML
aav00660 C5-Branched dibasic acid metabolism SBML MML
aav00670 One carbon pool by folate SBML MML
aav00680 Methane metabolism SBML MML
aav00710 (Undocumented) SBML MML
aav00720 (Undocumented) SBML MML
aav00730 Thiamine metabolism SBML MML
aav00740 Riboflavin metabolism SBML MML
aav00750 Vitamin B6 metabolism SBML MML
aav00760 Nicotinate and nicotinamide metabolism SBML MML
aav00770 Pantothenate and CoA biosynthesis SBML MML
aav00780 Biotin metabolism SBML MML
aav00785 Lipoic acid metabolism SBML MML
aav00790 Folate biosynthesis SBML MML
aav00791 Atrazine degradation SBML MML
aav00860 Porphyrin and chlorophyll metabolism SBML MML
aav00900 Terpenoid backbone biosynthesis SBML MML
aav00903 (Undocumented) SBML MML
aav00910 Nitrogen metabolism SBML MML
aav00920 Sulfur metabolism SBML MML
aav00930 Caprolactam degradation SBML MML
aav00950 (Undocumented) SBML MML
aav00960 (Undocumented) SBML MML
aav00970 Aminoacyl-tRNA biosynthesis SBML MML
aav00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
aav00982 (Undocumented) SBML MML
aav00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.