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Kegg pathway models for JSim

Organism ago: Ashbya gossypii (Eremothecium gossypii)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
ago00010 Glycolysis / Gluconeogenesis SBML MML
ago00020 Citrate cycle (TCA cycle) SBML MML
ago00030 Pentose phosphate pathway SBML MML
ago00040 Pentose and glucuronate interconversions SBML MML
ago00051 Fructose and mannose metabolism SBML MML
ago00052 Galactose metabolism SBML MML
ago00061 Fatty acid biosynthesis SBML MML
ago00062 Fatty acid elongation in mitochondria SBML MML
ago00071 Fatty acid metabolism SBML MML
ago00072 Synthesis and degradation of ketone bodies SBML MML
ago00100 (Undocumented) SBML MML
ago00120 (Undocumented) SBML MML
ago00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ago00220 (Undocumented) SBML MML
ago00230 Purine metabolism SBML MML
ago00240 Pyrimidine metabolism SBML MML
ago00251 (Undocumented) SBML MML
ago00252 (Undocumented) SBML MML
ago00260 Glycine, serine and threonine metabolism SBML MML
ago00271 (Undocumented) SBML MML
ago00272 (Undocumented) SBML MML
ago00280 Valine, leucine and isoleucine degradation SBML MML
ago00281 Geraniol degradation SBML MML
ago00290 Valine, leucine and isoleucine biosynthesis SBML MML
ago00300 Lysine biosynthesis SBML MML
ago00310 Lysine degradation SBML MML
ago00330 Arginine and proline metabolism SBML MML
ago00340 Histidine metabolism SBML MML
ago00350 Tyrosine metabolism SBML MML
ago00360 Phenylalanine metabolism SBML MML
ago00361 gamma-Hexachlorocyclohexane degradation SBML MML
ago00362 (Undocumented) SBML MML
ago00364 Fluorobenzoate degradation SBML MML
ago00380 Tryptophan metabolism SBML MML
ago00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ago00401 Novobiocin biosynthesis SBML MML
ago00410 beta-Alanine metabolism SBML MML
ago00440 Phosphonate and phosphinate metabolism SBML MML
ago00450 Selenoamino acid metabolism SBML MML
ago00460 (Undocumented) SBML MML
ago00480 Glutathione metabolism SBML MML
ago00500 Starch and sucrose metabolism SBML MML
ago00510 (Undocumented) SBML MML
ago00521 Streptomycin biosynthesis SBML MML
ago00530 (Undocumented) SBML MML
ago00550 Peptidoglycan biosynthesis SBML MML
ago00561 Glycerolipid metabolism SBML MML
ago00562 Inositol phosphate metabolism SBML MML
ago00564 Glycerophospholipid metabolism SBML MML
ago00565 Ether lipid metabolism SBML MML
ago00590 Arachidonic acid metabolism SBML MML
ago00592 alpha-Linolenic acid metabolism SBML MML
ago00600 Sphingolipid metabolism SBML MML
ago00620 Pyruvate metabolism SBML MML
ago00624 1- and 2-Methylnaphthalene degradation SBML MML
ago00627 1,4-Dichlorobenzene degradation SBML MML
ago00630 Glyoxylate and dicarboxylate metabolism SBML MML
ago00632 (Undocumented) SBML MML
ago00640 Propanoate metabolism SBML MML
ago00641 3-Chloroacrylic acid degradation SBML MML
ago00650 Butanoate metabolism SBML MML
ago00670 One carbon pool by folate SBML MML
ago00680 Methane metabolism SBML MML
ago00710 (Undocumented) SBML MML
ago00720 (Undocumented) SBML MML
ago00730 Thiamine metabolism SBML MML
ago00740 Riboflavin metabolism SBML MML
ago00750 Vitamin B6 metabolism SBML MML
ago00760 Nicotinate and nicotinamide metabolism SBML MML
ago00770 Pantothenate and CoA biosynthesis SBML MML
ago00780 Biotin metabolism SBML MML
ago00785 Lipoic acid metabolism SBML MML
ago00790 Folate biosynthesis SBML MML
ago00860 Porphyrin and chlorophyll metabolism SBML MML
ago00900 Terpenoid backbone biosynthesis SBML MML
ago00903 (Undocumented) SBML MML
ago00910 Nitrogen metabolism SBML MML
ago00920 Sulfur metabolism SBML MML
ago00960 (Undocumented) SBML MML
ago00970 Aminoacyl-tRNA biosynthesis SBML MML
ago00982 (Undocumented) SBML MML
ago00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.