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Kegg pathway models for JSim

Organism deb: Dehalococcoides sp. BAV1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
deb00010 Glycolysis / Gluconeogenesis SBML MML
deb00020 Citrate cycle (TCA cycle) SBML MML
deb00030 Pentose phosphate pathway SBML MML
deb00040 Pentose and glucuronate interconversions SBML MML
deb00051 Fructose and mannose metabolism SBML MML
deb00052 Galactose metabolism SBML MML
deb00061 Fatty acid biosynthesis SBML MML
deb00100 (Undocumented) SBML MML
deb00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
deb00220 (Undocumented) SBML MML
deb00230 Purine metabolism SBML MML
deb00240 Pyrimidine metabolism SBML MML
deb00251 (Undocumented) SBML MML
deb00252 (Undocumented) SBML MML
deb00260 Glycine, serine and threonine metabolism SBML MML
deb00271 (Undocumented) SBML MML
deb00272 (Undocumented) SBML MML
deb00280 Valine, leucine and isoleucine degradation SBML MML
deb00290 Valine, leucine and isoleucine biosynthesis SBML MML
deb00300 Lysine biosynthesis SBML MML
deb00330 Arginine and proline metabolism SBML MML
deb00340 Histidine metabolism SBML MML
deb00350 Tyrosine metabolism SBML MML
deb00360 Phenylalanine metabolism SBML MML
deb00380 Tryptophan metabolism SBML MML
deb00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
deb00401 Novobiocin biosynthesis SBML MML
deb00410 beta-Alanine metabolism SBML MML
deb00450 Selenoamino acid metabolism SBML MML
deb00520 Amino sugar and nucleotide sugar metabolism SBML MML
deb00521 Streptomycin biosynthesis SBML MML
deb00550 Peptidoglycan biosynthesis SBML MML
deb00564 Glycerophospholipid metabolism SBML MML
deb00620 Pyruvate metabolism SBML MML
deb00630 Glyoxylate and dicarboxylate metabolism SBML MML
deb00640 Propanoate metabolism SBML MML
deb00650 Butanoate metabolism SBML MML
deb00670 One carbon pool by folate SBML MML
deb00680 Methane metabolism SBML MML
deb00710 (Undocumented) SBML MML
deb00720 (Undocumented) SBML MML
deb00730 Thiamine metabolism SBML MML
deb00740 Riboflavin metabolism SBML MML
deb00750 Vitamin B6 metabolism SBML MML
deb00760 Nicotinate and nicotinamide metabolism SBML MML
deb00770 Pantothenate and CoA biosynthesis SBML MML
deb00780 Biotin metabolism SBML MML
deb00790 Folate biosynthesis SBML MML
deb00860 Porphyrin and chlorophyll metabolism SBML MML
deb00900 Terpenoid backbone biosynthesis SBML MML
deb00910 Nitrogen metabolism SBML MML
deb00920 Sulfur metabolism SBML MML
deb00941 (Undocumented) SBML MML
deb00970 Aminoacyl-tRNA biosynthesis SBML MML
deb00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.