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Kegg pathway models for JSim

Organism ecp: Escherichia coli 536 (UPEC)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
ecp00010 Glycolysis / Gluconeogenesis SBML MML
ecp00020 Citrate cycle (TCA cycle) SBML MML
ecp00030 Pentose phosphate pathway SBML MML
ecp00040 Pentose and glucuronate interconversions SBML MML
ecp00051 Fructose and mannose metabolism SBML MML
ecp00052 Galactose metabolism SBML MML
ecp00053 Ascorbate and aldarate metabolism SBML MML
ecp00061 Fatty acid biosynthesis SBML MML
ecp00062 Fatty acid elongation in mitochondria SBML MML
ecp00071 Fatty acid metabolism SBML MML
ecp00100 (Undocumented) SBML MML
ecp00120 (Undocumented) SBML MML
ecp00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ecp00150 Androgen and estrogen metabolism SBML MML
ecp00220 (Undocumented) SBML MML
ecp00230 Purine metabolism SBML MML
ecp00240 Pyrimidine metabolism SBML MML
ecp00251 (Undocumented) SBML MML
ecp00252 (Undocumented) SBML MML
ecp00260 Glycine, serine and threonine metabolism SBML MML
ecp00271 (Undocumented) SBML MML
ecp00272 (Undocumented) SBML MML
ecp00280 Valine, leucine and isoleucine degradation SBML MML
ecp00281 Geraniol degradation SBML MML
ecp00290 Valine, leucine and isoleucine biosynthesis SBML MML
ecp00300 Lysine biosynthesis SBML MML
ecp00310 Lysine degradation SBML MML
ecp00330 Arginine and proline metabolism SBML MML
ecp00340 Histidine metabolism SBML MML
ecp00350 Tyrosine metabolism SBML MML
ecp00360 Phenylalanine metabolism SBML MML
ecp00361 gamma-Hexachlorocyclohexane degradation SBML MML
ecp00364 Fluorobenzoate degradation SBML MML
ecp00380 Tryptophan metabolism SBML MML
ecp00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ecp00401 Novobiocin biosynthesis SBML MML
ecp00410 beta-Alanine metabolism SBML MML
ecp00430 Taurine and hypotaurine metabolism SBML MML
ecp00440 Phosphonate and phosphinate metabolism SBML MML
ecp00450 Selenoamino acid metabolism SBML MML
ecp00460 (Undocumented) SBML MML
ecp00471 D-Glutamine and D-glutamate metabolism SBML MML
ecp00473 D-Alanine metabolism SBML MML
ecp00480 Glutathione metabolism SBML MML
ecp00500 Starch and sucrose metabolism SBML MML
ecp00520 Amino sugar and nucleotide sugar metabolism SBML MML
ecp00521 Streptomycin biosynthesis SBML MML
ecp00523 Polyketide sugar unit biosynthesis SBML MML
ecp00530 (Undocumented) SBML MML
ecp00540 Lipopolysaccharide biosynthesis SBML MML
ecp00550 Peptidoglycan biosynthesis SBML MML
ecp00561 Glycerolipid metabolism SBML MML
ecp00562 Inositol phosphate metabolism SBML MML
ecp00564 Glycerophospholipid metabolism SBML MML
ecp00565 Ether lipid metabolism SBML MML
ecp00590 Arachidonic acid metabolism SBML MML
ecp00591 Linoleic acid metabolism SBML MML
ecp00592 alpha-Linolenic acid metabolism SBML MML
ecp00600 Sphingolipid metabolism SBML MML
ecp00620 Pyruvate metabolism SBML MML
ecp00624 1- and 2-Methylnaphthalene degradation SBML MML
ecp00627 1,4-Dichlorobenzene degradation SBML MML
ecp00630 Glyoxylate and dicarboxylate metabolism SBML MML
ecp00632 (Undocumented) SBML MML
ecp00633 Trinitrotoluene degradation SBML MML
ecp00640 Propanoate metabolism SBML MML
ecp00641 3-Chloroacrylic acid degradation SBML MML
ecp00642 Ethylbenzene degradation SBML MML
ecp00643 Styrene degradation SBML MML
ecp00650 Butanoate metabolism SBML MML
ecp00660 C5-Branched dibasic acid metabolism SBML MML
ecp00670 One carbon pool by folate SBML MML
ecp00680 Methane metabolism SBML MML
ecp00710 (Undocumented) SBML MML
ecp00720 (Undocumented) SBML MML
ecp00730 Thiamine metabolism SBML MML
ecp00740 Riboflavin metabolism SBML MML
ecp00750 Vitamin B6 metabolism SBML MML
ecp00760 Nicotinate and nicotinamide metabolism SBML MML
ecp00770 Pantothenate and CoA biosynthesis SBML MML
ecp00780 Biotin metabolism SBML MML
ecp00785 Lipoic acid metabolism SBML MML
ecp00790 Folate biosynthesis SBML MML
ecp00791 Atrazine degradation SBML MML
ecp00860 Porphyrin and chlorophyll metabolism SBML MML
ecp00900 Terpenoid backbone biosynthesis SBML MML
ecp00903 (Undocumented) SBML MML
ecp00910 Nitrogen metabolism SBML MML
ecp00920 Sulfur metabolism SBML MML
ecp00930 Caprolactam degradation SBML MML
ecp00950 (Undocumented) SBML MML
ecp00960 (Undocumented) SBML MML
ecp00970 Aminoacyl-tRNA biosynthesis SBML MML
ecp00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ecp00982 (Undocumented) SBML MML
ecp00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.