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Kegg pathway models for JSim

Organism hmo: Heliobacterium modesticaldum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
hmo00010 Glycolysis / Gluconeogenesis SBML MML
hmo00020 Citrate cycle (TCA cycle) SBML MML
hmo00030 Pentose phosphate pathway SBML MML
hmo00040 Pentose and glucuronate interconversions SBML MML
hmo00051 Fructose and mannose metabolism SBML MML
hmo00052 Galactose metabolism SBML MML
hmo00061 Fatty acid biosynthesis SBML MML
hmo00062 Fatty acid elongation in mitochondria SBML MML
hmo00071 Fatty acid metabolism SBML MML
hmo00100 (Undocumented) SBML MML
hmo00120 (Undocumented) SBML MML
hmo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
hmo00220 (Undocumented) SBML MML
hmo00230 Purine metabolism SBML MML
hmo00240 Pyrimidine metabolism SBML MML
hmo00251 (Undocumented) SBML MML
hmo00252 (Undocumented) SBML MML
hmo00260 Glycine, serine and threonine metabolism SBML MML
hmo00271 (Undocumented) SBML MML
hmo00272 (Undocumented) SBML MML
hmo00280 Valine, leucine and isoleucine degradation SBML MML
hmo00281 Geraniol degradation SBML MML
hmo00290 Valine, leucine and isoleucine biosynthesis SBML MML
hmo00300 Lysine biosynthesis SBML MML
hmo00310 Lysine degradation SBML MML
hmo00330 Arginine and proline metabolism SBML MML
hmo00340 Histidine metabolism SBML MML
hmo00350 Tyrosine metabolism SBML MML
hmo00360 Phenylalanine metabolism SBML MML
hmo00380 Tryptophan metabolism SBML MML
hmo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
hmo00401 Novobiocin biosynthesis SBML MML
hmo00410 beta-Alanine metabolism SBML MML
hmo00450 Selenoamino acid metabolism SBML MML
hmo00471 D-Glutamine and D-glutamate metabolism SBML MML
hmo00473 D-Alanine metabolism SBML MML
hmo00480 Glutathione metabolism SBML MML
hmo00500 Starch and sucrose metabolism SBML MML
hmo00520 Amino sugar and nucleotide sugar metabolism SBML MML
hmo00521 Streptomycin biosynthesis SBML MML
hmo00530 (Undocumented) SBML MML
hmo00550 Peptidoglycan biosynthesis SBML MML
hmo00561 Glycerolipid metabolism SBML MML
hmo00564 Glycerophospholipid metabolism SBML MML
hmo00592 alpha-Linolenic acid metabolism SBML MML
hmo00620 Pyruvate metabolism SBML MML
hmo00624 1- and 2-Methylnaphthalene degradation SBML MML
hmo00630 Glyoxylate and dicarboxylate metabolism SBML MML
hmo00632 (Undocumented) SBML MML
hmo00640 Propanoate metabolism SBML MML
hmo00642 Ethylbenzene degradation SBML MML
hmo00650 Butanoate metabolism SBML MML
hmo00660 C5-Branched dibasic acid metabolism SBML MML
hmo00670 One carbon pool by folate SBML MML
hmo00680 Methane metabolism SBML MML
hmo00710 (Undocumented) SBML MML
hmo00720 (Undocumented) SBML MML
hmo00730 Thiamine metabolism SBML MML
hmo00740 Riboflavin metabolism SBML MML
hmo00750 Vitamin B6 metabolism SBML MML
hmo00760 Nicotinate and nicotinamide metabolism SBML MML
hmo00770 Pantothenate and CoA biosynthesis SBML MML
hmo00780 Biotin metabolism SBML MML
hmo00790 Folate biosynthesis SBML MML
hmo00860 Porphyrin and chlorophyll metabolism SBML MML
hmo00900 Terpenoid backbone biosynthesis SBML MML
hmo00910 Nitrogen metabolism SBML MML
hmo00920 Sulfur metabolism SBML MML
hmo00930 Caprolactam degradation SBML MML
hmo00941 (Undocumented) SBML MML
hmo00960 (Undocumented) SBML MML
hmo00970 Aminoacyl-tRNA biosynthesis SBML MML
hmo00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.