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Kegg pathway models for JSim

Organism lin: Listeria innocua

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
lin00010 Glycolysis / Gluconeogenesis SBML MML
lin00020 Citrate cycle (TCA cycle) SBML MML
lin00030 Pentose phosphate pathway SBML MML
lin00031 (Undocumented) SBML MML
lin00040 Pentose and glucuronate interconversions SBML MML
lin00051 Fructose and mannose metabolism SBML MML
lin00052 Galactose metabolism SBML MML
lin00061 Fatty acid biosynthesis SBML MML
lin00071 Fatty acid metabolism SBML MML
lin00072 Synthesis and degradation of ketone bodies SBML MML
lin00100 (Undocumented) SBML MML
lin00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lin00220 (Undocumented) SBML MML
lin00230 Purine metabolism SBML MML
lin00240 Pyrimidine metabolism SBML MML
lin00251 (Undocumented) SBML MML
lin00252 (Undocumented) SBML MML
lin00260 Glycine, serine and threonine metabolism SBML MML
lin00271 (Undocumented) SBML MML
lin00272 (Undocumented) SBML MML
lin00280 Valine, leucine and isoleucine degradation SBML MML
lin00290 Valine, leucine and isoleucine biosynthesis SBML MML
lin00300 Lysine biosynthesis SBML MML
lin00310 Lysine degradation SBML MML
lin00330 Arginine and proline metabolism SBML MML
lin00340 Histidine metabolism SBML MML
lin00350 Tyrosine metabolism SBML MML
lin00360 Phenylalanine metabolism SBML MML
lin00361 gamma-Hexachlorocyclohexane degradation SBML MML
lin00380 Tryptophan metabolism SBML MML
lin00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lin00401 Novobiocin biosynthesis SBML MML
lin00410 beta-Alanine metabolism SBML MML
lin00430 Taurine and hypotaurine metabolism SBML MML
lin00440 Phosphonate and phosphinate metabolism SBML MML
lin00450 Selenoamino acid metabolism SBML MML
lin00460 (Undocumented) SBML MML
lin00471 D-Glutamine and D-glutamate metabolism SBML MML
lin00472 D-Arginine and D-ornithine metabolism SBML MML
lin00473 D-Alanine metabolism SBML MML
lin00480 Glutathione metabolism SBML MML
lin00500 Starch and sucrose metabolism SBML MML
lin00520 Amino sugar and nucleotide sugar metabolism SBML MML
lin00521 Streptomycin biosynthesis SBML MML
lin00530 (Undocumented) SBML MML
lin00550 Peptidoglycan biosynthesis SBML MML
lin00561 Glycerolipid metabolism SBML MML
lin00562 Inositol phosphate metabolism SBML MML
lin00564 Glycerophospholipid metabolism SBML MML
lin00590 Arachidonic acid metabolism SBML MML
lin00620 Pyruvate metabolism SBML MML
lin00624 1- and 2-Methylnaphthalene degradation SBML MML
lin00626 Naphthalene and anthracene degradation SBML MML
lin00630 Glyoxylate and dicarboxylate metabolism SBML MML
lin00632 (Undocumented) SBML MML
lin00640 Propanoate metabolism SBML MML
lin00641 3-Chloroacrylic acid degradation SBML MML
lin00643 Styrene degradation SBML MML
lin00650 Butanoate metabolism SBML MML
lin00660 C5-Branched dibasic acid metabolism SBML MML
lin00670 One carbon pool by folate SBML MML
lin00680 Methane metabolism SBML MML
lin00710 (Undocumented) SBML MML
lin00720 (Undocumented) SBML MML
lin00730 Thiamine metabolism SBML MML
lin00740 Riboflavin metabolism SBML MML
lin00750 Vitamin B6 metabolism SBML MML
lin00760 Nicotinate and nicotinamide metabolism SBML MML
lin00770 Pantothenate and CoA biosynthesis SBML MML
lin00780 Biotin metabolism SBML MML
lin00785 Lipoic acid metabolism SBML MML
lin00790 Folate biosynthesis SBML MML
lin00860 Porphyrin and chlorophyll metabolism SBML MML
lin00900 Terpenoid backbone biosynthesis SBML MML
lin00903 (Undocumented) SBML MML
lin00910 Nitrogen metabolism SBML MML
lin00920 Sulfur metabolism SBML MML
lin00960 (Undocumented) SBML MML
lin00970 Aminoacyl-tRNA biosynthesis SBML MML
lin00982 (Undocumented) SBML MML
lin00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.