This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Kegg pathway models for JSim

Organism pmc: Prochlorococcus marinus MIT 9515

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
pmc00010 Glycolysis / Gluconeogenesis SBML MML
pmc00020 Citrate cycle (TCA cycle) SBML MML
pmc00030 Pentose phosphate pathway SBML MML
pmc00040 Pentose and glucuronate interconversions SBML MML
pmc00051 Fructose and mannose metabolism SBML MML
pmc00052 Galactose metabolism SBML MML
pmc00053 Ascorbate and aldarate metabolism SBML MML
pmc00061 Fatty acid biosynthesis SBML MML
pmc00071 Fatty acid metabolism SBML MML
pmc00100 (Undocumented) SBML MML
pmc00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
pmc00220 (Undocumented) SBML MML
pmc00230 Purine metabolism SBML MML
pmc00240 Pyrimidine metabolism SBML MML
pmc00251 (Undocumented) SBML MML
pmc00252 (Undocumented) SBML MML
pmc00260 Glycine, serine and threonine metabolism SBML MML
pmc00271 (Undocumented) SBML MML
pmc00272 (Undocumented) SBML MML
pmc00280 Valine, leucine and isoleucine degradation SBML MML
pmc00290 Valine, leucine and isoleucine biosynthesis SBML MML
pmc00300 Lysine biosynthesis SBML MML
pmc00310 Lysine degradation SBML MML
pmc00330 Arginine and proline metabolism SBML MML
pmc00340 Histidine metabolism SBML MML
pmc00350 Tyrosine metabolism SBML MML
pmc00360 Phenylalanine metabolism SBML MML
pmc00380 Tryptophan metabolism SBML MML
pmc00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
pmc00401 Novobiocin biosynthesis SBML MML
pmc00410 beta-Alanine metabolism SBML MML
pmc00450 Selenoamino acid metabolism SBML MML
pmc00460 (Undocumented) SBML MML
pmc00471 D-Glutamine and D-glutamate metabolism SBML MML
pmc00472 D-Arginine and D-ornithine metabolism SBML MML
pmc00473 D-Alanine metabolism SBML MML
pmc00480 Glutathione metabolism SBML MML
pmc00500 Starch and sucrose metabolism SBML MML
pmc00520 Amino sugar and nucleotide sugar metabolism SBML MML
pmc00521 Streptomycin biosynthesis SBML MML
pmc00523 Polyketide sugar unit biosynthesis SBML MML
pmc00530 (Undocumented) SBML MML
pmc00540 Lipopolysaccharide biosynthesis SBML MML
pmc00550 Peptidoglycan biosynthesis SBML MML
pmc00561 Glycerolipid metabolism SBML MML
pmc00562 Inositol phosphate metabolism SBML MML
pmc00564 Glycerophospholipid metabolism SBML MML
pmc00590 Arachidonic acid metabolism SBML MML
pmc00620 Pyruvate metabolism SBML MML
pmc00630 Glyoxylate and dicarboxylate metabolism SBML MML
pmc00640 Propanoate metabolism SBML MML
pmc00641 3-Chloroacrylic acid degradation SBML MML
pmc00643 Styrene degradation SBML MML
pmc00650 Butanoate metabolism SBML MML
pmc00670 One carbon pool by folate SBML MML
pmc00680 Methane metabolism SBML MML
pmc00710 (Undocumented) SBML MML
pmc00720 (Undocumented) SBML MML
pmc00730 Thiamine metabolism SBML MML
pmc00740 Riboflavin metabolism SBML MML
pmc00750 Vitamin B6 metabolism SBML MML
pmc00760 Nicotinate and nicotinamide metabolism SBML MML
pmc00770 Pantothenate and CoA biosynthesis SBML MML
pmc00780 Biotin metabolism SBML MML
pmc00785 Lipoic acid metabolism SBML MML
pmc00790 Folate biosynthesis SBML MML
pmc00860 Porphyrin and chlorophyll metabolism SBML MML
pmc00900 Terpenoid backbone biosynthesis SBML MML
pmc00906 Carotenoid biosynthesis SBML MML
pmc00910 Nitrogen metabolism SBML MML
pmc00920 Sulfur metabolism SBML MML
pmc00941 (Undocumented) SBML MML
pmc00970 Aminoacyl-tRNA biosynthesis SBML MML
pmc00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
pmc00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.