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Kegg pathway models for JSim

Organism ppg: Pseudomonas putida GB-1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
ppg00010 Glycolysis / Gluconeogenesis SBML MML
ppg00020 Citrate cycle (TCA cycle) SBML MML
ppg00030 Pentose phosphate pathway SBML MML
ppg00031 (Undocumented) SBML MML
ppg00040 Pentose and glucuronate interconversions SBML MML
ppg00051 Fructose and mannose metabolism SBML MML
ppg00052 Galactose metabolism SBML MML
ppg00053 Ascorbate and aldarate metabolism SBML MML
ppg00061 Fatty acid biosynthesis SBML MML
ppg00062 Fatty acid elongation in mitochondria SBML MML
ppg00071 Fatty acid metabolism SBML MML
ppg00072 Synthesis and degradation of ketone bodies SBML MML
ppg00100 (Undocumented) SBML MML
ppg00120 (Undocumented) SBML MML
ppg00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ppg00220 (Undocumented) SBML MML
ppg00230 Purine metabolism SBML MML
ppg00240 Pyrimidine metabolism SBML MML
ppg00251 (Undocumented) SBML MML
ppg00252 (Undocumented) SBML MML
ppg00260 Glycine, serine and threonine metabolism SBML MML
ppg00271 (Undocumented) SBML MML
ppg00272 (Undocumented) SBML MML
ppg00280 Valine, leucine and isoleucine degradation SBML MML
ppg00281 Geraniol degradation SBML MML
ppg00290 Valine, leucine and isoleucine biosynthesis SBML MML
ppg00300 Lysine biosynthesis SBML MML
ppg00310 Lysine degradation SBML MML
ppg00330 Arginine and proline metabolism SBML MML
ppg00340 Histidine metabolism SBML MML
ppg00350 Tyrosine metabolism SBML MML
ppg00360 Phenylalanine metabolism SBML MML
ppg00361 gamma-Hexachlorocyclohexane degradation SBML MML
ppg00362 (Undocumented) SBML MML
ppg00364 Fluorobenzoate degradation SBML MML
ppg00380 Tryptophan metabolism SBML MML
ppg00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ppg00401 Novobiocin biosynthesis SBML MML
ppg00410 beta-Alanine metabolism SBML MML
ppg00430 Taurine and hypotaurine metabolism SBML MML
ppg00440 Phosphonate and phosphinate metabolism SBML MML
ppg00450 Selenoamino acid metabolism SBML MML
ppg00460 (Undocumented) SBML MML
ppg00471 D-Glutamine and D-glutamate metabolism SBML MML
ppg00473 D-Alanine metabolism SBML MML
ppg00480 Glutathione metabolism SBML MML
ppg00500 Starch and sucrose metabolism SBML MML
ppg00520 Amino sugar and nucleotide sugar metabolism SBML MML
ppg00521 Streptomycin biosynthesis SBML MML
ppg00523 Polyketide sugar unit biosynthesis SBML MML
ppg00530 (Undocumented) SBML MML
ppg00540 Lipopolysaccharide biosynthesis SBML MML
ppg00550 Peptidoglycan biosynthesis SBML MML
ppg00561 Glycerolipid metabolism SBML MML
ppg00562 Inositol phosphate metabolism SBML MML
ppg00564 Glycerophospholipid metabolism SBML MML
ppg00590 Arachidonic acid metabolism SBML MML
ppg00592 alpha-Linolenic acid metabolism SBML MML
ppg00620 Pyruvate metabolism SBML MML
ppg00621 (Undocumented) SBML MML
ppg00622 Toluene and xylene degradation SBML MML
ppg00623 2,4-Dichlorobenzoate degradation SBML MML
ppg00624 1- and 2-Methylnaphthalene degradation SBML MML
ppg00626 Naphthalene and anthracene degradation SBML MML
ppg00627 1,4-Dichlorobenzene degradation SBML MML
ppg00628 Fluorene degradation SBML MML
ppg00630 Glyoxylate and dicarboxylate metabolism SBML MML
ppg00631 1,2-Dichloroethane degradation SBML MML
ppg00632 (Undocumented) SBML MML
ppg00633 Trinitrotoluene degradation SBML MML
ppg00640 Propanoate metabolism SBML MML
ppg00641 3-Chloroacrylic acid degradation SBML MML
ppg00643 Styrene degradation SBML MML
ppg00650 Butanoate metabolism SBML MML
ppg00660 C5-Branched dibasic acid metabolism SBML MML
ppg00670 One carbon pool by folate SBML MML
ppg00680 Methane metabolism SBML MML
ppg00710 (Undocumented) SBML MML
ppg00720 (Undocumented) SBML MML
ppg00730 Thiamine metabolism SBML MML
ppg00740 Riboflavin metabolism SBML MML
ppg00750 Vitamin B6 metabolism SBML MML
ppg00760 Nicotinate and nicotinamide metabolism SBML MML
ppg00770 Pantothenate and CoA biosynthesis SBML MML
ppg00780 Biotin metabolism SBML MML
ppg00785 Lipoic acid metabolism SBML MML
ppg00790 Folate biosynthesis SBML MML
ppg00791 Atrazine degradation SBML MML
ppg00860 Porphyrin and chlorophyll metabolism SBML MML
ppg00900 Terpenoid backbone biosynthesis SBML MML
ppg00903 (Undocumented) SBML MML
ppg00910 Nitrogen metabolism SBML MML
ppg00920 Sulfur metabolism SBML MML
ppg00930 Caprolactam degradation SBML MML
ppg00940 (Undocumented) SBML MML
ppg00950 (Undocumented) SBML MML
ppg00960 (Undocumented) SBML MML
ppg00970 Aminoacyl-tRNA biosynthesis SBML MML
ppg00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ppg00982 (Undocumented) SBML MML
ppg00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.