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Kegg pathway models for JSim

Organism ppu: Pseudomonas putida KT2440

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
ppu00010 Glycolysis / Gluconeogenesis SBML MML
ppu00020 Citrate cycle (TCA cycle) SBML MML
ppu00030 Pentose phosphate pathway SBML MML
ppu00031 (Undocumented) SBML MML
ppu00040 Pentose and glucuronate interconversions SBML MML
ppu00051 Fructose and mannose metabolism SBML MML
ppu00052 Galactose metabolism SBML MML
ppu00053 Ascorbate and aldarate metabolism SBML MML
ppu00061 Fatty acid biosynthesis SBML MML
ppu00062 Fatty acid elongation in mitochondria SBML MML
ppu00071 Fatty acid metabolism SBML MML
ppu00072 Synthesis and degradation of ketone bodies SBML MML
ppu00100 (Undocumented) SBML MML
ppu00120 (Undocumented) SBML MML
ppu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ppu00220 (Undocumented) SBML MML
ppu00230 Purine metabolism SBML MML
ppu00240 Pyrimidine metabolism SBML MML
ppu00251 (Undocumented) SBML MML
ppu00252 (Undocumented) SBML MML
ppu00260 Glycine, serine and threonine metabolism SBML MML
ppu00271 (Undocumented) SBML MML
ppu00272 (Undocumented) SBML MML
ppu00280 Valine, leucine and isoleucine degradation SBML MML
ppu00281 Geraniol degradation SBML MML
ppu00290 Valine, leucine and isoleucine biosynthesis SBML MML
ppu00300 Lysine biosynthesis SBML MML
ppu00310 Lysine degradation SBML MML
ppu00330 Arginine and proline metabolism SBML MML
ppu00340 Histidine metabolism SBML MML
ppu00350 Tyrosine metabolism SBML MML
ppu00360 Phenylalanine metabolism SBML MML
ppu00361 gamma-Hexachlorocyclohexane degradation SBML MML
ppu00362 (Undocumented) SBML MML
ppu00363 Bisphenol A degradation SBML MML
ppu00364 Fluorobenzoate degradation SBML MML
ppu00380 Tryptophan metabolism SBML MML
ppu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ppu00401 Novobiocin biosynthesis SBML MML
ppu00410 beta-Alanine metabolism SBML MML
ppu00430 Taurine and hypotaurine metabolism SBML MML
ppu00440 Phosphonate and phosphinate metabolism SBML MML
ppu00450 Selenoamino acid metabolism SBML MML
ppu00460 (Undocumented) SBML MML
ppu00471 D-Glutamine and D-glutamate metabolism SBML MML
ppu00473 D-Alanine metabolism SBML MML
ppu00480 Glutathione metabolism SBML MML
ppu00500 Starch and sucrose metabolism SBML MML
ppu00520 Amino sugar and nucleotide sugar metabolism SBML MML
ppu00521 Streptomycin biosynthesis SBML MML
ppu00523 Polyketide sugar unit biosynthesis SBML MML
ppu00530 (Undocumented) SBML MML
ppu00540 Lipopolysaccharide biosynthesis SBML MML
ppu00550 Peptidoglycan biosynthesis SBML MML
ppu00561 Glycerolipid metabolism SBML MML
ppu00562 Inositol phosphate metabolism SBML MML
ppu00564 Glycerophospholipid metabolism SBML MML
ppu00590 Arachidonic acid metabolism SBML MML
ppu00592 alpha-Linolenic acid metabolism SBML MML
ppu00620 Pyruvate metabolism SBML MML
ppu00622 Toluene and xylene degradation SBML MML
ppu00623 2,4-Dichlorobenzoate degradation SBML MML
ppu00624 1- and 2-Methylnaphthalene degradation SBML MML
ppu00626 Naphthalene and anthracene degradation SBML MML
ppu00627 1,4-Dichlorobenzene degradation SBML MML
ppu00628 Fluorene degradation SBML MML
ppu00629 Carbazole degradation SBML MML
ppu00630 Glyoxylate and dicarboxylate metabolism SBML MML
ppu00631 1,2-Dichloroethane degradation SBML MML
ppu00632 (Undocumented) SBML MML
ppu00633 Trinitrotoluene degradation SBML MML
ppu00640 Propanoate metabolism SBML MML
ppu00641 3-Chloroacrylic acid degradation SBML MML
ppu00642 Ethylbenzene degradation SBML MML
ppu00643 Styrene degradation SBML MML
ppu00650 Butanoate metabolism SBML MML
ppu00660 C5-Branched dibasic acid metabolism SBML MML
ppu00670 One carbon pool by folate SBML MML
ppu00680 Methane metabolism SBML MML
ppu00710 (Undocumented) SBML MML
ppu00720 (Undocumented) SBML MML
ppu00730 Thiamine metabolism SBML MML
ppu00740 Riboflavin metabolism SBML MML
ppu00750 Vitamin B6 metabolism SBML MML
ppu00760 Nicotinate and nicotinamide metabolism SBML MML
ppu00770 Pantothenate and CoA biosynthesis SBML MML
ppu00780 Biotin metabolism SBML MML
ppu00785 Lipoic acid metabolism SBML MML
ppu00790 Folate biosynthesis SBML MML
ppu00791 Atrazine degradation SBML MML
ppu00860 Porphyrin and chlorophyll metabolism SBML MML
ppu00900 Terpenoid backbone biosynthesis SBML MML
ppu00903 (Undocumented) SBML MML
ppu00906 Carotenoid biosynthesis SBML MML
ppu00910 Nitrogen metabolism SBML MML
ppu00920 Sulfur metabolism SBML MML
ppu00930 Caprolactam degradation SBML MML
ppu00940 (Undocumented) SBML MML
ppu00950 (Undocumented) SBML MML
ppu00960 (Undocumented) SBML MML
ppu00970 Aminoacyl-tRNA biosynthesis SBML MML
ppu00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ppu00982 (Undocumented) SBML MML
ppu00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.