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Kegg pathway models for JSim

Organism rno: Rattus norvegicus (rat)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
rno00010 Glycolysis / Gluconeogenesis SBML MML
rno00020 Citrate cycle (TCA cycle) SBML MML
rno00030 Pentose phosphate pathway SBML MML
rno00031 (Undocumented) SBML MML
rno00040 Pentose and glucuronate interconversions SBML MML
rno00051 Fructose and mannose metabolism SBML MML
rno00052 Galactose metabolism SBML MML
rno00053 Ascorbate and aldarate metabolism SBML MML
rno00061 Fatty acid biosynthesis SBML MML
rno00062 Fatty acid elongation in mitochondria SBML MML
rno00071 Fatty acid metabolism SBML MML
rno00072 Synthesis and degradation of ketone bodies SBML MML
rno00100 (Undocumented) SBML MML
rno00120 (Undocumented) SBML MML
rno00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
rno00140 (Undocumented) SBML MML
rno00150 Androgen and estrogen metabolism SBML MML
rno00220 (Undocumented) SBML MML
rno00230 Purine metabolism SBML MML
rno00232 Caffeine metabolism SBML MML
rno00240 Pyrimidine metabolism SBML MML
rno00251 (Undocumented) SBML MML
rno00252 (Undocumented) SBML MML
rno00260 Glycine, serine and threonine metabolism SBML MML
rno00271 (Undocumented) SBML MML
rno00272 (Undocumented) SBML MML
rno00280 Valine, leucine and isoleucine degradation SBML MML
rno00290 Valine, leucine and isoleucine biosynthesis SBML MML
rno00310 Lysine degradation SBML MML
rno00330 Arginine and proline metabolism SBML MML
rno00340 Histidine metabolism SBML MML
rno00350 Tyrosine metabolism SBML MML
rno00360 Phenylalanine metabolism SBML MML
rno00361 gamma-Hexachlorocyclohexane degradation SBML MML
rno00363 Bisphenol A degradation SBML MML
rno00364 Fluorobenzoate degradation SBML MML
rno00380 Tryptophan metabolism SBML MML
rno00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
rno00401 Novobiocin biosynthesis SBML MML
rno00410 beta-Alanine metabolism SBML MML
rno00430 Taurine and hypotaurine metabolism SBML MML
rno00440 Phosphonate and phosphinate metabolism SBML MML
rno00450 Selenoamino acid metabolism SBML MML
rno00460 (Undocumented) SBML MML
rno00471 D-Glutamine and D-glutamate metabolism SBML MML
rno00472 D-Arginine and D-ornithine metabolism SBML MML
rno00480 Glutathione metabolism SBML MML
rno00500 Starch and sucrose metabolism SBML MML
rno00510 (Undocumented) SBML MML
rno00520 Amino sugar and nucleotide sugar metabolism SBML MML
rno00521 Streptomycin biosynthesis SBML MML
rno00530 (Undocumented) SBML MML
rno00550 Peptidoglycan biosynthesis SBML MML
rno00561 Glycerolipid metabolism SBML MML
rno00562 Inositol phosphate metabolism SBML MML
rno00564 Glycerophospholipid metabolism SBML MML
rno00565 Ether lipid metabolism SBML MML
rno00590 Arachidonic acid metabolism SBML MML
rno00591 Linoleic acid metabolism SBML MML
rno00592 alpha-Linolenic acid metabolism SBML MML
rno00600 Sphingolipid metabolism SBML MML
rno00620 Pyruvate metabolism SBML MML
rno00624 1- and 2-Methylnaphthalene degradation SBML MML
rno00625 (Undocumented) SBML MML
rno00627 1,4-Dichlorobenzene degradation SBML MML
rno00630 Glyoxylate and dicarboxylate metabolism SBML MML
rno00632 (Undocumented) SBML MML
rno00640 Propanoate metabolism SBML MML
rno00641 3-Chloroacrylic acid degradation SBML MML
rno00643 Styrene degradation SBML MML
rno00650 Butanoate metabolism SBML MML
rno00670 One carbon pool by folate SBML MML
rno00680 Methane metabolism SBML MML
rno00710 (Undocumented) SBML MML
rno00720 (Undocumented) SBML MML
rno00730 Thiamine metabolism SBML MML
rno00740 Riboflavin metabolism SBML MML
rno00750 Vitamin B6 metabolism SBML MML
rno00760 Nicotinate and nicotinamide metabolism SBML MML
rno00770 Pantothenate and CoA biosynthesis SBML MML
rno00780 Biotin metabolism SBML MML
rno00785 Lipoic acid metabolism SBML MML
rno00790 Folate biosynthesis SBML MML
rno00791 Atrazine degradation SBML MML
rno00830 Retinol metabolism SBML MML
rno00860 Porphyrin and chlorophyll metabolism SBML MML
rno00900 Terpenoid backbone biosynthesis SBML MML
rno00902 Monoterpenoid biosynthesis SBML MML
rno00903 (Undocumented) SBML MML
rno00910 Nitrogen metabolism SBML MML
rno00920 Sulfur metabolism SBML MML
rno00930 Caprolactam degradation SBML MML
rno00940 (Undocumented) SBML MML
rno00950 (Undocumented) SBML MML
rno00960 (Undocumented) SBML MML
rno00970 Aminoacyl-tRNA biosynthesis SBML MML
rno00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
rno00982 (Undocumented) SBML MML
rno00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.