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Kegg pathway models for JSim

Organism sbm: Shewanella baltica OS185

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
sbm00010 Glycolysis / Gluconeogenesis SBML MML
sbm00020 Citrate cycle (TCA cycle) SBML MML
sbm00030 Pentose phosphate pathway SBML MML
sbm00031 (Undocumented) SBML MML
sbm00040 Pentose and glucuronate interconversions SBML MML
sbm00051 Fructose and mannose metabolism SBML MML
sbm00052 Galactose metabolism SBML MML
sbm00053 Ascorbate and aldarate metabolism SBML MML
sbm00061 Fatty acid biosynthesis SBML MML
sbm00071 Fatty acid metabolism SBML MML
sbm00072 Synthesis and degradation of ketone bodies SBML MML
sbm00100 (Undocumented) SBML MML
sbm00120 (Undocumented) SBML MML
sbm00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sbm00220 (Undocumented) SBML MML
sbm00230 Purine metabolism SBML MML
sbm00240 Pyrimidine metabolism SBML MML
sbm00251 (Undocumented) SBML MML
sbm00252 (Undocumented) SBML MML
sbm00260 Glycine, serine and threonine metabolism SBML MML
sbm00271 (Undocumented) SBML MML
sbm00272 (Undocumented) SBML MML
sbm00280 Valine, leucine and isoleucine degradation SBML MML
sbm00281 Geraniol degradation SBML MML
sbm00290 Valine, leucine and isoleucine biosynthesis SBML MML
sbm00300 Lysine biosynthesis SBML MML
sbm00310 Lysine degradation SBML MML
sbm00330 Arginine and proline metabolism SBML MML
sbm00340 Histidine metabolism SBML MML
sbm00350 Tyrosine metabolism SBML MML
sbm00360 Phenylalanine metabolism SBML MML
sbm00361 gamma-Hexachlorocyclohexane degradation SBML MML
sbm00362 (Undocumented) SBML MML
sbm00364 Fluorobenzoate degradation SBML MML
sbm00380 Tryptophan metabolism SBML MML
sbm00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sbm00401 Novobiocin biosynthesis SBML MML
sbm00410 beta-Alanine metabolism SBML MML
sbm00430 Taurine and hypotaurine metabolism SBML MML
sbm00450 Selenoamino acid metabolism SBML MML
sbm00460 (Undocumented) SBML MML
sbm00471 D-Glutamine and D-glutamate metabolism SBML MML
sbm00473 D-Alanine metabolism SBML MML
sbm00480 Glutathione metabolism SBML MML
sbm00500 Starch and sucrose metabolism SBML MML
sbm00520 Amino sugar and nucleotide sugar metabolism SBML MML
sbm00521 Streptomycin biosynthesis SBML MML
sbm00523 Polyketide sugar unit biosynthesis SBML MML
sbm00530 (Undocumented) SBML MML
sbm00540 Lipopolysaccharide biosynthesis SBML MML
sbm00550 Peptidoglycan biosynthesis SBML MML
sbm00561 Glycerolipid metabolism SBML MML
sbm00562 Inositol phosphate metabolism SBML MML
sbm00564 Glycerophospholipid metabolism SBML MML
sbm00590 Arachidonic acid metabolism SBML MML
sbm00592 alpha-Linolenic acid metabolism SBML MML
sbm00620 Pyruvate metabolism SBML MML
sbm00624 1- and 2-Methylnaphthalene degradation SBML MML
sbm00626 Naphthalene and anthracene degradation SBML MML
sbm00627 1,4-Dichlorobenzene degradation SBML MML
sbm00630 Glyoxylate and dicarboxylate metabolism SBML MML
sbm00631 1,2-Dichloroethane degradation SBML MML
sbm00632 (Undocumented) SBML MML
sbm00633 Trinitrotoluene degradation SBML MML
sbm00640 Propanoate metabolism SBML MML
sbm00641 3-Chloroacrylic acid degradation SBML MML
sbm00642 Ethylbenzene degradation SBML MML
sbm00643 Styrene degradation SBML MML
sbm00650 Butanoate metabolism SBML MML
sbm00660 C5-Branched dibasic acid metabolism SBML MML
sbm00670 One carbon pool by folate SBML MML
sbm00680 Methane metabolism SBML MML
sbm00710 (Undocumented) SBML MML
sbm00720 (Undocumented) SBML MML
sbm00730 Thiamine metabolism SBML MML
sbm00740 Riboflavin metabolism SBML MML
sbm00750 Vitamin B6 metabolism SBML MML
sbm00760 Nicotinate and nicotinamide metabolism SBML MML
sbm00770 Pantothenate and CoA biosynthesis SBML MML
sbm00780 Biotin metabolism SBML MML
sbm00790 Folate biosynthesis SBML MML
sbm00791 Atrazine degradation SBML MML
sbm00860 Porphyrin and chlorophyll metabolism SBML MML
sbm00900 Terpenoid backbone biosynthesis SBML MML
sbm00903 (Undocumented) SBML MML
sbm00910 Nitrogen metabolism SBML MML
sbm00920 Sulfur metabolism SBML MML
sbm00930 Caprolactam degradation SBML MML
sbm00941 (Undocumented) SBML MML
sbm00950 (Undocumented) SBML MML
sbm00960 (Undocumented) SBML MML
sbm00970 Aminoacyl-tRNA biosynthesis SBML MML
sbm00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
sbm00982 (Undocumented) SBML MML
sbm00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.