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Kegg pathway models for JSim

Organism ssn: Shigella sonnei

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
ssn00010 Glycolysis / Gluconeogenesis SBML MML
ssn00020 Citrate cycle (TCA cycle) SBML MML
ssn00030 Pentose phosphate pathway SBML MML
ssn00040 Pentose and glucuronate interconversions SBML MML
ssn00051 Fructose and mannose metabolism SBML MML
ssn00052 Galactose metabolism SBML MML
ssn00053 Ascorbate and aldarate metabolism SBML MML
ssn00061 Fatty acid biosynthesis SBML MML
ssn00062 Fatty acid elongation in mitochondria SBML MML
ssn00071 Fatty acid metabolism SBML MML
ssn00072 Synthesis and degradation of ketone bodies SBML MML
ssn00100 (Undocumented) SBML MML
ssn00120 (Undocumented) SBML MML
ssn00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ssn00220 (Undocumented) SBML MML
ssn00230 Purine metabolism SBML MML
ssn00240 Pyrimidine metabolism SBML MML
ssn00251 (Undocumented) SBML MML
ssn00252 (Undocumented) SBML MML
ssn00260 Glycine, serine and threonine metabolism SBML MML
ssn00271 (Undocumented) SBML MML
ssn00272 (Undocumented) SBML MML
ssn00280 Valine, leucine and isoleucine degradation SBML MML
ssn00281 Geraniol degradation SBML MML
ssn00290 Valine, leucine and isoleucine biosynthesis SBML MML
ssn00300 Lysine biosynthesis SBML MML
ssn00310 Lysine degradation SBML MML
ssn00330 Arginine and proline metabolism SBML MML
ssn00340 Histidine metabolism SBML MML
ssn00350 Tyrosine metabolism SBML MML
ssn00360 Phenylalanine metabolism SBML MML
ssn00361 gamma-Hexachlorocyclohexane degradation SBML MML
ssn00362 (Undocumented) SBML MML
ssn00364 Fluorobenzoate degradation SBML MML
ssn00380 Tryptophan metabolism SBML MML
ssn00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ssn00401 Novobiocin biosynthesis SBML MML
ssn00410 beta-Alanine metabolism SBML MML
ssn00430 Taurine and hypotaurine metabolism SBML MML
ssn00450 Selenoamino acid metabolism SBML MML
ssn00460 (Undocumented) SBML MML
ssn00471 D-Glutamine and D-glutamate metabolism SBML MML
ssn00473 D-Alanine metabolism SBML MML
ssn00480 Glutathione metabolism SBML MML
ssn00500 Starch and sucrose metabolism SBML MML
ssn00520 Amino sugar and nucleotide sugar metabolism SBML MML
ssn00521 Streptomycin biosynthesis SBML MML
ssn00523 Polyketide sugar unit biosynthesis SBML MML
ssn00530 (Undocumented) SBML MML
ssn00540 Lipopolysaccharide biosynthesis SBML MML
ssn00550 Peptidoglycan biosynthesis SBML MML
ssn00561 Glycerolipid metabolism SBML MML
ssn00562 Inositol phosphate metabolism SBML MML
ssn00564 Glycerophospholipid metabolism SBML MML
ssn00590 Arachidonic acid metabolism SBML MML
ssn00592 alpha-Linolenic acid metabolism SBML MML
ssn00600 Sphingolipid metabolism SBML MML
ssn00620 Pyruvate metabolism SBML MML
ssn00621 (Undocumented) SBML MML
ssn00622 Toluene and xylene degradation SBML MML
ssn00624 1- and 2-Methylnaphthalene degradation SBML MML
ssn00627 1,4-Dichlorobenzene degradation SBML MML
ssn00628 Fluorene degradation SBML MML
ssn00629 Carbazole degradation SBML MML
ssn00630 Glyoxylate and dicarboxylate metabolism SBML MML
ssn00632 (Undocumented) SBML MML
ssn00633 Trinitrotoluene degradation SBML MML
ssn00640 Propanoate metabolism SBML MML
ssn00641 3-Chloroacrylic acid degradation SBML MML
ssn00642 Ethylbenzene degradation SBML MML
ssn00643 Styrene degradation SBML MML
ssn00650 Butanoate metabolism SBML MML
ssn00660 C5-Branched dibasic acid metabolism SBML MML
ssn00670 One carbon pool by folate SBML MML
ssn00680 Methane metabolism SBML MML
ssn00710 (Undocumented) SBML MML
ssn00720 (Undocumented) SBML MML
ssn00730 Thiamine metabolism SBML MML
ssn00740 Riboflavin metabolism SBML MML
ssn00750 Vitamin B6 metabolism SBML MML
ssn00760 Nicotinate and nicotinamide metabolism SBML MML
ssn00770 Pantothenate and CoA biosynthesis SBML MML
ssn00780 Biotin metabolism SBML MML
ssn00785 Lipoic acid metabolism SBML MML
ssn00790 Folate biosynthesis SBML MML
ssn00791 Atrazine degradation SBML MML
ssn00860 Porphyrin and chlorophyll metabolism SBML MML
ssn00900 Terpenoid backbone biosynthesis SBML MML
ssn00903 (Undocumented) SBML MML
ssn00910 Nitrogen metabolism SBML MML
ssn00920 Sulfur metabolism SBML MML
ssn00930 Caprolactam degradation SBML MML
ssn00950 (Undocumented) SBML MML
ssn00960 (Undocumented) SBML MML
ssn00970 Aminoacyl-tRNA biosynthesis SBML MML
ssn00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ssn00982 (Undocumented) SBML MML
ssn00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.