This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Kegg pathway models for JSim

Organism sth: Symbiobacterium thermophilum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
sth00010 Glycolysis / Gluconeogenesis SBML MML
sth00020 Citrate cycle (TCA cycle) SBML MML
sth00030 Pentose phosphate pathway SBML MML
sth00040 Pentose and glucuronate interconversions SBML MML
sth00051 Fructose and mannose metabolism SBML MML
sth00052 Galactose metabolism SBML MML
sth00053 Ascorbate and aldarate metabolism SBML MML
sth00061 Fatty acid biosynthesis SBML MML
sth00071 Fatty acid metabolism SBML MML
sth00100 (Undocumented) SBML MML
sth00120 (Undocumented) SBML MML
sth00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sth00220 (Undocumented) SBML MML
sth00230 Purine metabolism SBML MML
sth00240 Pyrimidine metabolism SBML MML
sth00251 (Undocumented) SBML MML
sth00252 (Undocumented) SBML MML
sth00260 Glycine, serine and threonine metabolism SBML MML
sth00271 (Undocumented) SBML MML
sth00272 (Undocumented) SBML MML
sth00280 Valine, leucine and isoleucine degradation SBML MML
sth00281 Geraniol degradation SBML MML
sth00290 Valine, leucine and isoleucine biosynthesis SBML MML
sth00300 Lysine biosynthesis SBML MML
sth00310 Lysine degradation SBML MML
sth00311 Penicillin and cephalosporin biosynthesis SBML MML
sth00330 Arginine and proline metabolism SBML MML
sth00340 Histidine metabolism SBML MML
sth00350 Tyrosine metabolism SBML MML
sth00360 Phenylalanine metabolism SBML MML
sth00362 (Undocumented) SBML MML
sth00380 Tryptophan metabolism SBML MML
sth00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sth00401 Novobiocin biosynthesis SBML MML
sth00410 beta-Alanine metabolism SBML MML
sth00430 Taurine and hypotaurine metabolism SBML MML
sth00450 Selenoamino acid metabolism SBML MML
sth00460 (Undocumented) SBML MML
sth00471 D-Glutamine and D-glutamate metabolism SBML MML
sth00472 D-Arginine and D-ornithine metabolism SBML MML
sth00473 D-Alanine metabolism SBML MML
sth00480 Glutathione metabolism SBML MML
sth00500 Starch and sucrose metabolism SBML MML
sth00520 Amino sugar and nucleotide sugar metabolism SBML MML
sth00521 Streptomycin biosynthesis SBML MML
sth00530 (Undocumented) SBML MML
sth00550 Peptidoglycan biosynthesis SBML MML
sth00561 Glycerolipid metabolism SBML MML
sth00564 Glycerophospholipid metabolism SBML MML
sth00592 alpha-Linolenic acid metabolism SBML MML
sth00600 Sphingolipid metabolism SBML MML
sth00620 Pyruvate metabolism SBML MML
sth00624 1- and 2-Methylnaphthalene degradation SBML MML
sth00628 Fluorene degradation SBML MML
sth00630 Glyoxylate and dicarboxylate metabolism SBML MML
sth00632 (Undocumented) SBML MML
sth00640 Propanoate metabolism SBML MML
sth00641 3-Chloroacrylic acid degradation SBML MML
sth00642 Ethylbenzene degradation SBML MML
sth00650 Butanoate metabolism SBML MML
sth00660 C5-Branched dibasic acid metabolism SBML MML
sth00670 One carbon pool by folate SBML MML
sth00680 Methane metabolism SBML MML
sth00710 (Undocumented) SBML MML
sth00720 (Undocumented) SBML MML
sth00730 Thiamine metabolism SBML MML
sth00740 Riboflavin metabolism SBML MML
sth00750 Vitamin B6 metabolism SBML MML
sth00760 Nicotinate and nicotinamide metabolism SBML MML
sth00770 Pantothenate and CoA biosynthesis SBML MML
sth00780 Biotin metabolism SBML MML
sth00785 Lipoic acid metabolism SBML MML
sth00790 Folate biosynthesis SBML MML
sth00860 Porphyrin and chlorophyll metabolism SBML MML
sth00900 Terpenoid backbone biosynthesis SBML MML
sth00903 (Undocumented) SBML MML
sth00910 Nitrogen metabolism SBML MML
sth00920 Sulfur metabolism SBML MML
sth00930 Caprolactam degradation SBML MML
sth00940 (Undocumented) SBML MML
sth00950 (Undocumented) SBML MML
sth00960 (Undocumented) SBML MML
sth00970 Aminoacyl-tRNA biosynthesis SBML MML
sth00982 (Undocumented) SBML MML
sth00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.