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Kegg pathway models for JSim

Organism vei: Verminephrobacter eiseniae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Java WS
vei00010 Glycolysis / Gluconeogenesis SBML MML
vei00020 Citrate cycle (TCA cycle) SBML MML
vei00030 Pentose phosphate pathway SBML MML
vei00031 (Undocumented) SBML MML
vei00040 Pentose and glucuronate interconversions SBML MML
vei00051 Fructose and mannose metabolism SBML MML
vei00052 Galactose metabolism SBML MML
vei00053 Ascorbate and aldarate metabolism SBML MML
vei00061 Fatty acid biosynthesis SBML MML
vei00062 Fatty acid elongation in mitochondria SBML MML
vei00071 Fatty acid metabolism SBML MML
vei00072 Synthesis and degradation of ketone bodies SBML MML
vei00100 (Undocumented) SBML MML
vei00120 (Undocumented) SBML MML
vei00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
vei00220 (Undocumented) SBML MML
vei00230 Purine metabolism SBML MML
vei00240 Pyrimidine metabolism SBML MML
vei00251 (Undocumented) SBML MML
vei00252 (Undocumented) SBML MML
vei00260 Glycine, serine and threonine metabolism SBML MML
vei00271 (Undocumented) SBML MML
vei00272 (Undocumented) SBML MML
vei00280 Valine, leucine and isoleucine degradation SBML MML
vei00281 Geraniol degradation SBML MML
vei00290 Valine, leucine and isoleucine biosynthesis SBML MML
vei00300 Lysine biosynthesis SBML MML
vei00310 Lysine degradation SBML MML
vei00311 Penicillin and cephalosporin biosynthesis SBML MML
vei00330 Arginine and proline metabolism SBML MML
vei00340 Histidine metabolism SBML MML
vei00350 Tyrosine metabolism SBML MML
vei00360 Phenylalanine metabolism SBML MML
vei00361 gamma-Hexachlorocyclohexane degradation SBML MML
vei00362 (Undocumented) SBML MML
vei00363 Bisphenol A degradation SBML MML
vei00364 Fluorobenzoate degradation SBML MML
vei00380 Tryptophan metabolism SBML MML
vei00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
vei00401 Novobiocin biosynthesis SBML MML
vei00410 beta-Alanine metabolism SBML MML
vei00430 Taurine and hypotaurine metabolism SBML MML
vei00450 Selenoamino acid metabolism SBML MML
vei00460 (Undocumented) SBML MML
vei00471 D-Glutamine and D-glutamate metabolism SBML MML
vei00473 D-Alanine metabolism SBML MML
vei00480 Glutathione metabolism SBML MML
vei00500 Starch and sucrose metabolism SBML MML
vei00520 Amino sugar and nucleotide sugar metabolism SBML MML
vei00521 Streptomycin biosynthesis SBML MML
vei00523 Polyketide sugar unit biosynthesis SBML MML
vei00530 (Undocumented) SBML MML
vei00540 Lipopolysaccharide biosynthesis SBML MML
vei00550 Peptidoglycan biosynthesis SBML MML
vei00561 Glycerolipid metabolism SBML MML
vei00562 Inositol phosphate metabolism SBML MML
vei00564 Glycerophospholipid metabolism SBML MML
vei00565 Ether lipid metabolism SBML MML
vei00592 alpha-Linolenic acid metabolism SBML MML
vei00620 Pyruvate metabolism SBML MML
vei00622 Toluene and xylene degradation SBML MML
vei00623 2,4-Dichlorobenzoate degradation SBML MML
vei00624 1- and 2-Methylnaphthalene degradation SBML MML
vei00626 Naphthalene and anthracene degradation SBML MML
vei00627 1,4-Dichlorobenzene degradation SBML MML
vei00628 Fluorene degradation SBML MML
vei00629 Carbazole degradation SBML MML
vei00630 Glyoxylate and dicarboxylate metabolism SBML MML
vei00631 1,2-Dichloroethane degradation SBML MML
vei00632 (Undocumented) SBML MML
vei00640 Propanoate metabolism SBML MML
vei00641 3-Chloroacrylic acid degradation SBML MML
vei00642 Ethylbenzene degradation SBML MML
vei00643 Styrene degradation SBML MML
vei00650 Butanoate metabolism SBML MML
vei00660 C5-Branched dibasic acid metabolism SBML MML
vei00670 One carbon pool by folate SBML MML
vei00680 Methane metabolism SBML MML
vei00710 (Undocumented) SBML MML
vei00720 (Undocumented) SBML MML
vei00730 Thiamine metabolism SBML MML
vei00740 Riboflavin metabolism SBML MML
vei00750 Vitamin B6 metabolism SBML MML
vei00760 Nicotinate and nicotinamide metabolism SBML MML
vei00770 Pantothenate and CoA biosynthesis SBML MML
vei00780 Biotin metabolism SBML MML
vei00785 Lipoic acid metabolism SBML MML
vei00790 Folate biosynthesis SBML MML
vei00791 Atrazine degradation SBML MML
vei00860 Porphyrin and chlorophyll metabolism SBML MML
vei00900 Terpenoid backbone biosynthesis SBML MML
vei00903 (Undocumented) SBML MML
vei00910 Nitrogen metabolism SBML MML
vei00920 Sulfur metabolism SBML MML
vei00930 Caprolactam degradation SBML MML
vei00940 (Undocumented) SBML MML
vei00950 (Undocumented) SBML MML
vei00960 (Undocumented) SBML MML
vei00970 Aminoacyl-tRNA biosynthesis SBML MML
vei00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
vei00982 (Undocumented) SBML MML
vei00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.